RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 TICRRQ7Z2Z1 1910 aa22.39■■□□□ 1.17
PNKP-209ENST00000596726 PATJQ8NI35 1801 aa22.38■■□□□ 1.17
PNKP-209ENST00000596726 P4HA2O15460 535 aa22.38■■□□□ 1.17
PNKP-209ENST00000596726 FCHO2Q0JRZ9 810 aa22.38■■□□□ 1.17
PNKP-209ENST00000596726 TMEM105Q8N8V8 129 aa22.38■■□□□ 1.17
PNKP-209ENST00000596726 ZMIZ2Q8NF64 920 aa22.38■■□□□ 1.17
PNKP-209ENST00000596726 FLCNQ8NFG4 579 aa22.38■■□□□ 1.17
PNKP-209ENST00000596726 SLC2A14Q8TDB8 520 aa22.38■■□□□ 1.17
PNKP-209ENST00000596726 DNASE1L2Q92874 299 aa22.38■■□□□ 1.17
PNKP-209ENST00000596726 HNRNPABQ99729 332 aaKnown RBP22.38■■□□□ 1.17
PNKP-209ENST00000596726 ARID3AQ99856 593 aa22.38■■□□□ 1.17
PNKP-209ENST00000596726 KCNH6Q9H252 994 aa22.38■■□□□ 1.17
PNKP-209ENST00000596726 BRD9Q9H8M2 597 aa22.38■■□□□ 1.17
PNKP-209ENST00000596726 CISHQ9NSE2 258 aa22.38■■□□□ 1.17
PNKP-209ENST00000596726 GOLGA6L22H0YM25 854 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 TNFRSF10BO14763 440 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 AP1G2O75843 785 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 CCDC192P0DO97 292 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 GDI1P31150 447 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 PRKCQQ04759 706 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 KCNH2Q12809 1159 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 MLF2Q15773 248 aaPredicted RBP22.37■■□□□ 1.17
PNKP-209ENST00000596726 DPCR1Q3MIW9 517 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 NUP93Q8N1F7 819 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 LMO3Q8TAP4 145 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 IRF7Q92985 503 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 CYFIP2Q96F07 1278 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 SMOQ99835 787 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 DDX23Q9BUQ8 820 aaKnown RBP22.37■■□□□ 1.17
PNKP-209ENST00000596726 TBC1D17Q9HA65 648 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 DMAP1Q9NPF5 467 aaPredicted RBP22.37■■□□□ 1.17
PNKP-209ENST00000596726 KRT82Q9NSB4 513 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 FAM49BQ9NUQ9 324 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 IL37Q9NZH6 218 aa22.37■■□□□ 1.17
PNKP-209ENST00000596726 COL4A3Q01955 1670 aa22.36■■□□□ 1.17
PNKP-209ENST00000596726 ARNTLO00327 626 aa22.36■■□□□ 1.17
PNKP-209ENST00000596726 CHADO15335 359 aa22.36■■□□□ 1.17
PNKP-209ENST00000596726 BEST1O76090 585 aa22.36■■□□□ 1.17
PNKP-209ENST00000596726 TRIM21P19474 475 aaKnown RBP22.36■■□□□ 1.17
PNKP-209ENST00000596726 AOC1P19801 751 aa22.36■■□□□ 1.17
PNKP-209ENST00000596726 RAD23BP54727 409 aa22.36■■□□□ 1.17
PNKP-209ENST00000596726 CUL2Q13617 745 aa22.36■■□□□ 1.17
PNKP-209ENST00000596726 RBM43Q6ZSC3 357 aaKnown RBP22.36■■□□□ 1.17
PNKP-209ENST00000596726 IRF2BP1Q8IU81 584 aa22.36■■□□□ 1.17
PNKP-209ENST00000596726 CELF5Q8N6W0 485 aaKnown RBP22.36■■□□□ 1.17
PNKP-209ENST00000596726 SLC4A11Q8NBS3 891 aa22.36■■□□□ 1.17
PNKP-209ENST00000596726 USP13Q92995 863 aaPredicted RBP22.36■■□□□ 1.17
PNKP-209ENST00000596726 SHDQ96IW2 340 aa22.36■■□□□ 1.17
PNKP-209ENST00000596726 SMG9Q9H0W8 520 aaKnown RBP22.36■■□□□ 1.17
PNKP-209ENST00000596726 GCNT4Q9P109 453 aa22.36■■□□□ 1.17
PNKP-209ENST00000596726 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.36■■□□□ 1.17
PNKP-209ENST00000596726 HELZP42694 1942 aaKnown RBP22.35■■□□□ 1.17
PNKP-209ENST00000596726 DPYSL4O14531 572 aa22.35■■□□□ 1.17
PNKP-209ENST00000596726 ZNF263O14978 683 aa22.35■■□□□ 1.17
PNKP-209ENST00000596726 PI15O43692 258 aa22.35■■□□□ 1.17
PNKP-209ENST00000596726 RTN3O95197 1032 aaPredicted RBP22.35■■□□□ 1.17
PNKP-209ENST00000596726 AFPP02771 609 aaKnown RBP22.35■■□□□ 1.17
PNKP-209ENST00000596726 AVPR1AP37288 418 aa22.35■■□□□ 1.17
PNKP-209ENST00000596726 PPP3CCP48454 512 aa22.35■■□□□ 1.17
PNKP-209ENST00000596726 ZNF268Q14587 947 aaPredicted RBP22.35■■□□□ 1.17
PNKP-209ENST00000596726 ZNF394Q53GI3 561 aa22.35■■□□□ 1.17
PNKP-209ENST00000596726 UBR7Q8N806 425 aa22.35■■□□□ 1.17
PNKP-209ENST00000596726 BPIFB1Q8TDL5 484 aa22.35■■□□□ 1.17
PNKP-209ENST00000596726 TMEM176AQ96HP8 235 aa22.35■■□□□ 1.17
PNKP-209ENST00000596726 SLC22A12Q96S37 553 aa22.35■■□□□ 1.17
PNKP-209ENST00000596726 DNAI2Q9GZS0 605 aa22.35■■□□□ 1.17
PNKP-209ENST00000596726 KIF9Q9HAQ2 790 aa22.35■■□□□ 1.17
PNKP-209ENST00000596726 TDP1Q9NUW8 608 aa22.35■■□□□ 1.17
PNKP-209ENST00000596726 COMMD8Q9NX08 183 aa22.35■■□□□ 1.17
PNKP-209ENST00000596726 TRPM5Q9NZQ8 1165 aa22.35■■□□□ 1.17
PNKP-209ENST00000596726 MIA3Q5JRA6 1907 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 FAM92AA1XBS5 289 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 ZNF840PA6NDX5 716 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 SHISA7A6NL88 538 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 PFKLP17858 780 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 TBXAS1P24557 533 aaPredicted RBP22.34■■□□□ 1.17
PNKP-209ENST00000596726 YWHAQP27348 245 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 ERCC5P28715 1186 aaPredicted RBP22.34■■□□□ 1.17
PNKP-209ENST00000596726 ADORA2BP29275 332 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 NUBP1P53384 320 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 CETN1Q12798 172 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 TAF10Q12962 218 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 PPP1R26Q5T8A7 1209 aaPredicted RBP22.34■■□□□ 1.17
PNKP-209ENST00000596726 CLEC20AQ6ZU45 233 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 YAF2Q8IY57 180 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 EHBP1Q8NDI1 1231 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 CNOT6LQ96LI5 555 aaKnown RBP22.34■■□□□ 1.17
PNKP-209ENST00000596726 HEBP1Q9NRV9 189 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 CCL26Q9Y258 94 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 F5P12259 2224 aa22.34■■□□□ 1.17
PNKP-209ENST00000596726 MUC6Q6W4X9 2439 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 TRAV19A0A0A6YYK7 116 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 C2orf78A6NCI8 922 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 HHLA1C9JL84 531 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 FAM200BP0CF97 657 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 SLC5A3P53794 718 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 MAP3K7CLP57077 242 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 LRMPQ12912 555 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 ARHGAP29Q52LW3 1261 aa22.33■■□□□ 1.17
PNKP-209ENST00000596726 CT47A1Q5JQC4 288 aaPredicted RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms