RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 EHD2Q9NZN4 543 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 EPS15L1Q9UBC2 864 aa15.21■□□□□ 0.03
LIG1-208ENST00000595758 AJAP1Q9UKB5 411 aaPredicted RBP15.21■□□□□ 0.03
LIG1-208ENST00000595758 NOTCH4Q99466 2003 aa15.21■□□□□ 0.02
LIG1-208ENST00000595758 PTPRDP23468 1912 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 A0A0C4DFX4 3053 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 A0A1W2PRU2 124 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 NRG2O14511 850 aaPredicted RBP15.2■□□□□ 0.02
LIG1-208ENST00000595758 MOSPD3O75425 235 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 BEST1O76090 585 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 SERPINC1P01008 464 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 UCHL3P15374 230 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 GJA1P17302 382 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 NPR3P17342 541 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 RFX1P22670 979 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 CDC25CP30307 473 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 KLK7P49862 253 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 TEAD2Q15562 447 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 GOLGA7BQ2TAP0 167 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 SMYD5Q6GMV2 418 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 NUP93Q8N1F7 819 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 ANKRD52Q8NB46 1076 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 ZMIZ2Q8NF64 920 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 TFAP2BQ92481 460 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 MCRS1Q96EZ8 462 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 ERGIC2Q96RQ1 377 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 ATXN3LQ9H3M9 355 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 CD320Q9NPF0 282 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 RTN4Q9NQC3 1192 aaKnown RBP15.2■□□□□ 0.02
LIG1-208ENST00000595758 FAM207AQ9NSI2 230 aaPredicted RBP15.2■□□□□ 0.02
LIG1-208ENST00000595758 UXTQ9UBK9 157 aaPredicted RBP15.2■□□□□ 0.02
LIG1-208ENST00000595758 LIMD1Q9UGP4 676 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 SIK3Q9Y2K2 1263 aa15.2■□□□□ 0.02
LIG1-208ENST00000595758 DENND4AQ7Z401 1863 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 O00370 1275 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 FOXN3O00409 490 aaPredicted RBP15.19■□□□□ 0.02
LIG1-208ENST00000595758 TEX33O43247 280 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 RTN3O95197 1032 aaPredicted RBP15.19■□□□□ 0.02
LIG1-208ENST00000595758 CALCAP01258 141 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 F11P03951 625 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 SLC8A3P57103 927 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 USP46P62068 366 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 FANCCQ00597 558 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 RAPGEF1Q13905 1077 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 DRAP1Q14919 205 aaPredicted RBP15.19■□□□□ 0.02
LIG1-208ENST00000595758 CNGA2Q16280 664 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 ARHGAP15Q53QZ3 475 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 LCLAT1Q6UWP7 414 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 CLEC20AQ6ZU45 233 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 NAP1L5Q96NT1 182 aaPredicted RBP15.19■□□□□ 0.02
LIG1-208ENST00000595758 TTLL2Q9BWV7 592 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 NAA15Q9BXJ9 866 aaKnown RBP15.19■□□□□ 0.02
LIG1-208ENST00000595758 STK33Q9BYT3 514 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 GPR88Q9GZN0 384 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 GANQ9H2C0 597 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 HESX1Q9UBX0 185 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 TSPAN16Q9UKR8 245 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 FHOD1Q9Y613 1164 aa15.19■□□□□ 0.02
LIG1-208ENST00000595758 C5orf42Q9H799 3197 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 A0A1B0GTH6 734 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 TNFRSF10BO14763 440 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 CYP26A1O43174 497 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 BRD2P25440 801 aaKnown RBP15.18■□□□□ 0.02
LIG1-208ENST00000595758 YWHAQP27348 245 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 IFRD2Q12894 506 aaPredicted RBP15.18■□□□□ 0.02
LIG1-208ENST00000595758 STILQ15468 1287 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 TMEM150AQ86TG1 271 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 TTC30AQ86WT1 665 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 RNF135Q8IUD6 432 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 FAM71AQ8IYT1 594 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 NEK11Q8NG66 645 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 SCAMP5Q8TAC9 235 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 ZSWIM1Q9BR11 485 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 COL25A1Q9BXS0 654 aaPredicted RBP15.18■□□□□ 0.02
LIG1-208ENST00000595758 UBXN6Q9BZV1 441 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 SLITRK6Q9H5Y7 841 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 PNPLA8Q9NP80 782 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 COMMD8Q9NX08 183 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 DAAM1Q9Y4D1 1078 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 BDP1A6H8Y1 2624 aa15.18■□□□□ 0.02
LIG1-208ENST00000595758 HHLA1C9JL84 531 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 SLC5A3P53794 718 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 BCAT1P54687 386 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 POLR2FP61218 127 aaKnown RBP15.17■□□□□ 0.02
LIG1-208ENST00000595758 CYP4F8P98187 520 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 PTK2Q05397 1052 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 TAF10Q12962 218 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 NR1I3Q14994 352 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 STXBP5Q5T5C0 1151 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 GPR158Q5T848 1215 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 POTEHQ6S545 545 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 RNF214Q8ND24 703 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 UBA3Q8TBC4 463 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 MRPS31Q92665 395 aaKnown RBP15.17■□□□□ 0.02
LIG1-208ENST00000595758 ZSWIM3Q96MP5 696 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 SLITRK1Q96PX8 696 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 TASP1Q9H6P5 420 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 ACP6Q9NPH0 428 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 IL37Q9NZH6 218 aa15.17■□□□□ 0.02
LIG1-208ENST00000595758 TRPM5Q9NZQ8 1165 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms