RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 GTPBP10A4D1E9 387 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 DCXO43602 365 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 NARSO43776 548 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 MICAL2O94851 1124 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 FAM200BP0CF97 657 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 ATP1A3P13637 1013 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 CD19P15391 556 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 ZNF18P17022 549 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 FCARP24071 287 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 COPB1P53618 953 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 YWHAEP62258 255 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 GCNT1Q02742 428 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 ARHGAP44Q17R89 818 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 SKOR2Q2VWA4 1001 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 DPY19L2P1Q6NXN4 242 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 CLEC20AQ6ZU45 233 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 GPRIN1Q7Z2K8 1008 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 RBBP8NLQ8NC74 664 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 SCAMP5Q8TAC9 235 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 ZSCAN18Q8TBC5 510 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 TFAP2BQ92481 460 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 TRMT2BQ96GJ1 504 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 MYRFLQ96LU7 910 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 BPIFA3Q9BQP9 254 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 PLA2G2FQ9BZM2 168 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 NAT10Q9H0A0 1025 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 SLITRK6Q9H5Y7 841 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 GDE1Q9NZC3 331 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 ZFP37Q9Y6Q3 630 aaPredicted RBP14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 BDP1A6H8Y1 2624 aa14.61□□□□□ -0.07
SHKBP1-207ENST00000595631 TECTAO75443 2155 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 KRT5P13647 590 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 TRIM21P19474 475 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 CDC25CP30307 473 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 VIPR2P41587 438 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 KLK7P49862 253 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 ZNF165P49910 485 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 GOLGA7BQ2TAP0 167 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 TANGO2Q6ICL3 276 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 NUP93Q8N1F7 819 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 RSPRY1Q96DX4 576 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 ASB16Q96NS5 453 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 GCNAQ96QF7 691 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 ZSWIM1Q9BR11 485 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 LSM14BQ9BX40 385 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 SMG9Q9H0W8 520 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 FAM124BQ9H5Z6 455 aaPredicted RBP14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 CSNK1G1Q9HCP0 422 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 IGSF9Q9P2J2 1179 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 APEX2Q9UBZ4 518 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 LIMA1Q9UHB6 759 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 SORCS3Q9UPU3 1222 aa14.6□□□□□ -0.07
SHKBP1-207ENST00000595631 BECN2A8MW95 431 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 HHLA1C9JL84 531 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 PI4K2BG5E9Z4 385 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 TNFRSF10BO14763 440 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 PRAMEF12O95522 483 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 FGF19O95750 216 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 PNMA6AP0CW24 399 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 NPR3P17342 541 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 CDK11BP21127 795 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 BRD2P25440 801 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 ZNF132P52740 706 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 SLC5A3P53794 718 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 ZXDAP98168 799 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 TDGQ13569 410 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 IQCB1Q15051 598 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 ARHGAP15Q53QZ3 475 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 SGO2Q562F6 1265 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 ARHGAP17Q68EM7 881 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 TXNDC8Q6A555 127 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 MTSS1LQ765P7 747 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 APTXQ7Z2E3 356 aaKnown RBP14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 TTC30AQ86WT1 665 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 SLC44A3Q8N4M1 653 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 MAB21L3Q8N8X9 362 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 SMARCD2Q92925 531 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 SLC22A12Q96S37 553 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 TTLL2Q9BWV7 592 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 SLC46A2Q9BY10 475 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 DUSP16Q9BY84 665 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 TASP1Q9H6P5 420 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 CBX8Q9HC52 389 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 ACP6Q9NPH0 428 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 UXTQ9UBK9 157 aaPredicted RBP14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 DNAJC12Q9UKB3 198 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 TSPAN16Q9UKR8 245 aa14.59□□□□□ -0.07
SHKBP1-207ENST00000595631 C2orf78A6NCI8 922 aa14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 FAM86C2PA6NEL3 165 aa14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 TULP2O00295 520 aa14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 O00370 1275 aa14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 VDRP11473 427 aa14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 YWHAQP27348 245 aa14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 USP8P40818 1118 aa14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 TAF10Q12962 218 aa14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 GRM2Q14416 872 aa14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 LUZP1Q86V48 1076 aa14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 UBA3Q8TBC4 463 aa14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 MRPS31Q92665 395 aaKnown RBP14.58□□□□□ -0.08
SHKBP1-207ENST00000595631 CEP295NLQ96MC4 621 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms