RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CYP1A2P05177 515 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 TMEM191BP0C7N4 346 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 STAG3L1P0CL83 205 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 MCF2P10911 925 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 TBXAS1P24557 533 aaPredicted RBP16.15■□□□□ 0.18
PNKP-204ENST00000594661 CACNA2D1P54289 1103 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 BEX3Q00994 111 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 SREBF2Q12772 1141 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 CLEC16AQ2KHT3 1053 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 KIZQ2M2Z5 673 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 ADAT2Q7Z6V5 191 aaKnown RBP16.15■□□□□ 0.18
PNKP-204ENST00000594661 ZNF564Q8TBZ8 553 aaPredicted RBP16.15■□□□□ 0.18
PNKP-204ENST00000594661 DYDC1Q8WWB3 177 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 CCDC28BQ9BUN5 200 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 PCDHB2Q9Y5E7 798 aa16.15■□□□□ 0.18
PNKP-204ENST00000594661 NVLO15381 856 aaKnown RBP16.14■□□□□ 0.17
PNKP-204ENST00000594661 TMCC1O94876 653 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 AGTP01019 485 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 NFICP08651 508 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 GM2AP17900 193 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 COMTP21964 271 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 LSAMPQ13449 338 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 MFSD10Q14728 455 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 MUM1Q2TAK8 710 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 CNPY1Q3B7I2 92 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 ACAD10Q6JQN1 1059 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 UBR7Q8N806 425 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 KRT35Q92764 455 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 PPP1R14BQ96C90 147 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 GBP5Q96PP8 586 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 TMEM237Q96Q45 408 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 NUDCD1Q96RS6 583 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 TXLNGQ9NUQ3 528 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 GTF3C4Q9UKN8 822 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 CNTN6Q9UQ52 1028 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 NR2E1Q9Y466 385 aa16.14■□□□□ 0.17
PNKP-204ENST00000594661 MAGEA13PA6NCF6 341 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 LACTBL1A8MY62 500 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 CFHP08603 1231 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 EIF4BP23588 611 aaKnown RBP16.13■□□□□ 0.17
PNKP-204ENST00000594661 MARCKSL1P49006 195 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 MPP3Q13368 585 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 CNGA2Q16280 664 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 ZNF410Q86VK4 478 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 GATA6Q92908 595 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 ANKRD36BP1Q96IX9 119 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 BTBD6Q96KE9 485 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 ZSWIM1Q9BR11 485 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 ADAMTS10Q9H324 1103 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 EPB41L4BQ9H329 900 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 PRDM16Q9HAZ2 1276 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 GINS2Q9Y248 185 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 WDR37Q9Y2I8 494 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 NRCAMQ92823 1304 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 TTI1O43156 1089 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 DAPK3O43293 454 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 ATP5HO75947 161 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 TJP3O95049 919 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 IL18RAPO95256 599 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 LMNAP02545 664 aaKnown RBP16.13■□□□□ 0.17
PNKP-204ENST00000594661 TNNC2P02585 160 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 MYL3P08590 195 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 UNGP13051 313 aaPredicted RBP16.13■□□□□ 0.17
PNKP-204ENST00000594661 SERPINB4P48594 390 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 BPIFB4P59827 614 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 OCRLQ01968 901 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 TRPC3Q13507 836 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 KCTD19Q17RG1 926 aaPredicted RBP16.13■□□□□ 0.17
PNKP-204ENST00000594661 RNF43Q68DV7 783 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 CROCCP2Q86T23 111 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 ZNF677Q86XU0 584 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 STKLD1Q8NE28 680 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 CELF4Q9BZC1 486 aaKnown RBP16.13■□□□□ 0.17
PNKP-204ENST00000594661 ARHGAP39Q9C0H5 1083 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 XYLT2Q9H1B5 865 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 CDHR5Q9HBB8 845 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 ETNK1Q9HBU6 452 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 NMRK1Q9NWW6 199 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 UVRAGQ9P2Y5 699 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 COMMD3-BMI1R4GMX3 469 aa16.13■□□□□ 0.17
PNKP-204ENST00000594661 MBLAC1A4D2B0 266 aaPredicted RBP16.12■□□□□ 0.17
PNKP-204ENST00000594661 SPOPO43791 374 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 GPR32O75388 356 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 SKIP12755 728 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 GNA15P30679 374 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 SSTR3P32745 418 aaPredicted RBP16.12■□□□□ 0.17
PNKP-204ENST00000594661 VHLP40337 213 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 TM4SF4P48230 202 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 PSEN2P49810 448 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 CPT1AP50416 773 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 CLUL1Q15846 466 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 ZNF699Q32M78 642 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 TNFAIP8L3Q5GJ75 292 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 JADE1Q6IE81 842 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 AADACL2Q6P093 401 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 ZNF365Q70YC5 407 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 FAM13CQ8NE31 585 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 TSPAN18Q96SJ8 248 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 SPATA16Q9BXB7 569 aa16.12■□□□□ 0.17
PNKP-204ENST00000594661 NIF3L1Q9GZT8 377 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms