RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 PPM1HQ9ULR3 514 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 TP53TG5Q9Y2B4 290 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 NFE2L3Q9Y4A8 694 aa3.37□□□□□ -1.87
VRK3-204ENST00000593912 ANAPC1Q9H1A4 1944 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 DIDO1Q9BTC0 2240 aaKnown RBP3.36□□□□□ -1.87
VRK3-204ENST00000593912 TNRC6AQ8NDV7 1962 aaKnown RBP3.36□□□□□ -1.87
VRK3-204ENST00000593912 SCN8AQ9UQD0 1980 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 PKDREJQ9NTG1 2253 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 IGKV6-21A0A0C4DH24 114 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 PNMA6FA0A0J9YX94 578 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 A0A1B0GVM2 712 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 WASH3PC4AMC7 463 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 PIK3CDO00329 1044 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 TRIM38O00635 465 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 TBX3O15119 743 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 TRIM24O15164 1050 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 B4GALT5O43286 388 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 SIGLEC6O43699 453 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 MARCH6O60337 910 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 SDC3O75056 442 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 ERLIN2O94905 339 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 SIX3O95343 332 aaPredicted RBP3.36□□□□□ -1.87
VRK3-204ENST00000593912 CYP17A1P05093 508 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 THP07101 528 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 PSAPP07602 524 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 EPHA8P29322 1005 aaPredicted RBP3.36□□□□□ -1.87
VRK3-204ENST00000593912 SLC5A2P31639 672 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 ALDH1A3P47895 512 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 GRIA4P48058 902 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 ASIC1P78348 528 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 E2F1Q01094 437 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 KLRB1Q12918 225 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 RESTQ13127 1097 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 NR1H3Q13133 447 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 MRPL58Q14197 206 aaKnown RBP3.36□□□□□ -1.87
VRK3-204ENST00000593912 ISXQ2M1V0 245 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 HSF5Q4G112 596 aaPredicted RBP3.36□□□□□ -1.87
VRK3-204ENST00000593912 LACTB2Q53H82 288 aaPredicted RBP3.36□□□□□ -1.87
VRK3-204ENST00000593912 PRR30Q53SZ7 412 aaPredicted RBP3.36□□□□□ -1.87
VRK3-204ENST00000593912 MANEAQ5SRI9 462 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 NOTUMQ6P988 496 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 TMC6Q7Z403 805 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 TMPRSS9Q7Z410 1059 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 GDF7Q7Z4P5 450 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 CDH24Q86UP0 819 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 DGKHQ86XP1 1220 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 JAMLQ86YT9 394 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 TMEM130Q8N3G9 435 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 KRI1Q8N9T8 703 aaKnown RBP3.36□□□□□ -1.87
VRK3-204ENST00000593912 TTC13Q8NBP0 860 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 ATAD1Q8NBU5 361 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 CADM4Q8NFZ8 388 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 GIPC2Q8TF65 315 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 JPH3Q8WXH2 748 aaPredicted RBP3.36□□□□□ -1.87
VRK3-204ENST00000593912 ARRDC3Q96B67 414 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 FAM167AQ96KS9 214 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 GCNAQ96QF7 691 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 CYP2S1Q96SQ9 504 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 PNKPQ96T60 521 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 ELF4Q99607 663 aaPredicted RBP3.36□□□□□ -1.87
VRK3-204ENST00000593912 GZF1Q9H116 711 aaPredicted RBP3.36□□□□□ -1.87
VRK3-204ENST00000593912 RIOX1Q9H6W3 641 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 KIF9Q9HAQ2 790 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 ANO2Q9NQ90 1003 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 ARHGEF4Q9NR80 690 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 TUBD1Q9UJT1 453 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 PCDHA6Q9UN73 950 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 DAAM1Q9Y4D1 1078 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 SAMM50Q9Y512 469 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 PCDHA8Q9Y5H6 950 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 ENTPD2Q9Y5L3 495 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 COL4A3BPQ9Y5P4 624 aa3.36□□□□□ -1.87
VRK3-204ENST00000593912 TDRD6O60522 2096 aaKnown RBP3.35□□□□□ -1.87
VRK3-204ENST00000593912 MYMKA6NI61 221 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 SPDYE3A6NKU9 549 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 TTLL8A6PVC2 850 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 TCP11X1B4DZS4 312 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 PRSS44E7EML9 344 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 H7C4K7 107 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 TMEM189-UBE2V1I3L0A0 370 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 AGRPO00253 132 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 PRICKLE3O43900 615 aaPredicted RBP3.35□□□□□ -1.87
VRK3-204ENST00000593912 TADA3O75528 432 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 NFATC1O95644 943 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 TRIM27P14373 513 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 ARF4P18085 180 aaPredicted RBP3.35□□□□□ -1.87
VRK3-204ENST00000593912 ATF6P18850 670 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 TGM2P21980 687 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 CDC25CP30307 473 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 NTSR1P30989 418 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 DNM2P50570 870 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 TPMTP51580 245 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 C21orf59P57076 290 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 DAB2P98082 770 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 CDC42EP1Q00587 391 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 SOX4Q06945 474 aaPredicted RBP3.35□□□□□ -1.87
VRK3-204ENST00000593912 AMHR2Q16671 573 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 UPP1Q16831 310 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 CEP55Q53EZ4 464 aa3.35□□□□□ -1.87
VRK3-204ENST00000593912 ZMYM1Q5SVZ6 1142 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms