RNA–Protein interactions for RNA: ENST00000593738.1

LTBP4-208, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 302 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-208ENST00000593738 ZNF518BQ9C0D4 1074 aa20.29■□□□□ 0.84
LTBP4-208ENST00000593738 MMRN2Q9H8L6 949 aa20.29■□□□□ 0.84
LTBP4-208ENST00000593738 TRPM5Q9NZQ8 1165 aa20.29■□□□□ 0.84
LTBP4-208ENST00000593738 MTF2Q9Y483 593 aaPredicted RBP20.29■□□□□ 0.84
LTBP4-208ENST00000593738 KIF26AQ9ULI4 1882 aaPredicted RBP20.28■□□□□ 0.84
LTBP4-208ENST00000593738 SHISA7A6NL88 538 aa20.28■□□□□ 0.84
LTBP4-208ENST00000593738 CLDN5O00501 218 aa20.28■□□□□ 0.84
LTBP4-208ENST00000593738 RTN3O95197 1032 aaPredicted RBP20.28■□□□□ 0.84
LTBP4-208ENST00000593738 TARSP26639 723 aaKnown RBP20.28■□□□□ 0.84
LTBP4-208ENST00000593738 MXI1P50539 228 aa20.28■□□□□ 0.84
LTBP4-208ENST00000593738 KPNA1P52294 538 aaPredicted RBP20.28■□□□□ 0.84
LTBP4-208ENST00000593738 PMS1P54277 932 aaKnown RBP20.28■□□□□ 0.84
LTBP4-208ENST00000593738 INCA1Q0VD86 236 aa20.28■□□□□ 0.84
LTBP4-208ENST00000593738 ACOT1Q86TX2 421 aa20.28■□□□□ 0.84
LTBP4-208ENST00000593738 C1orf210Q8IVY1 113 aa20.28■□□□□ 0.84
LTBP4-208ENST00000593738 TTC39CQ8N584 583 aa20.28■□□□□ 0.84
LTBP4-208ENST00000593738 FBXL13Q8NEE6 735 aa20.28■□□□□ 0.84
LTBP4-208ENST00000593738 FAM3CQ92520 227 aa20.28■□□□□ 0.84
LTBP4-208ENST00000593738 SMARCD1Q96GM5 515 aa20.28■□□□□ 0.84
LTBP4-208ENST00000593738 NIF3L1Q9GZT8 377 aa20.28■□□□□ 0.84
LTBP4-208ENST00000593738 FAM124BQ9H5Z6 455 aaPredicted RBP20.28■□□□□ 0.84
LTBP4-208ENST00000593738 METTL14Q9HCE5 456 aaKnown RBP20.28■□□□□ 0.84
LTBP4-208ENST00000593738 COL4A3Q01955 1670 aa20.28■□□□□ 0.84
LTBP4-208ENST00000593738 LRRN2O75325 713 aa20.27■□□□□ 0.84
LTBP4-208ENST00000593738 MRE11P49959 708 aa20.27■□□□□ 0.84
LTBP4-208ENST00000593738 USP46P62068 366 aa20.27■□□□□ 0.84
LTBP4-208ENST00000593738 MORC3Q14149 939 aa20.27■□□□□ 0.84
LTBP4-208ENST00000593738 ISM2Q6H9L7 571 aa20.27■□□□□ 0.84
LTBP4-208ENST00000593738 PAQR9Q6ZVX9 377 aa20.27■□□□□ 0.84
LTBP4-208ENST00000593738 FAM35AQ86V20 835 aa20.27■□□□□ 0.84
LTBP4-208ENST00000593738 RALGPS2Q86X27 583 aaPredicted RBP20.27■□□□□ 0.84
LTBP4-208ENST00000593738 NUP93Q8N1F7 819 aa20.27■□□□□ 0.84
LTBP4-208ENST00000593738 CEP63Q96MT8 703 aa20.27■□□□□ 0.84
LTBP4-208ENST00000593738 SLITRK1Q96PX8 696 aa20.27■□□□□ 0.84
LTBP4-208ENST00000593738 SMG9Q9H0W8 520 aaKnown RBP20.27■□□□□ 0.84
LTBP4-208ENST00000593738 APOBEC3GQ9HC16 384 aaKnown RBP20.27■□□□□ 0.84
LTBP4-208ENST00000593738 TRPC7Q9HCX4 862 aa20.27■□□□□ 0.84
LTBP4-208ENST00000593738 DMAP1Q9NPF5 467 aaPredicted RBP20.27■□□□□ 0.84
LTBP4-208ENST00000593738 COMMD8Q9NX08 183 aa20.27■□□□□ 0.84
LTBP4-208ENST00000593738 RAB20Q9NX57 234 aa20.27■□□□□ 0.84
LTBP4-208ENST00000593738 GCNT4Q9P109 453 aa20.27■□□□□ 0.84
LTBP4-208ENST00000593738 ARMCX3Q9UH62 379 aaPredicted RBP20.27■□□□□ 0.84
LTBP4-208ENST00000593738 TRIM49BA6NDI0 452 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 PROB1E7EW31 1015 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 CKMP06732 381 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 HDCP19113 662 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 NBL1P41271 181 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 CACNA2D1P54289 1103 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 WDR44Q5JSH3 913 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 TCERG1LQ5VWI1 586 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 CC2D1AQ6P1N0 951 aaPredicted RBP20.26■□□□□ 0.83
LTBP4-208ENST00000593738 FILIP1Q7Z7B0 1213 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 ALYREFQ86V81 257 aaKnown RBP20.26■□□□□ 0.83
LTBP4-208ENST00000593738 FUKQ8N0W3 1084 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 ZNF687Q8N1G0 1237 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 OVCA2Q8WZ82 227 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 FAM83CQ9BQN1 747 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 IER2Q9BTL4 223 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 NT5C1AQ9BXI3 368 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 GKN1Q9NS71 199 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 TMEM30AQ9NV96 361 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 FAM86C1Q9NVL1 165 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 CCL26Q9Y258 94 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 COQ4Q9Y3A0 265 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 CACNA1HO95180 2353 aa20.26■□□□□ 0.83
LTBP4-208ENST00000593738 MYH10P35580 1976 aa20.25■□□□□ 0.83
LTBP4-208ENST00000593738 BICDL2A1A5D9 508 aa20.25■□□□□ 0.83
LTBP4-208ENST00000593738 PPP1R3GB7ZBB8 358 aa20.25■□□□□ 0.83
LTBP4-208ENST00000593738 TCF3P15923 654 aa20.25■□□□□ 0.83
LTBP4-208ENST00000593738 CD44P16070 742 aaKnown RBP20.25■□□□□ 0.83
LTBP4-208ENST00000593738 YWHAQP27348 245 aa20.25■□□□□ 0.83
LTBP4-208ENST00000593738 FZD5Q13467 585 aa20.25■□□□□ 0.83
LTBP4-208ENST00000593738 ITPRIPL2Q3MIP1 535 aa20.25■□□□□ 0.83
LTBP4-208ENST00000593738 FRMD5Q7Z6J6 570 aa20.25■□□□□ 0.83
LTBP4-208ENST00000593738 TRIML1Q8N9V2 468 aa20.25■□□□□ 0.83
LTBP4-208ENST00000593738 PDZD8Q8NEN9 1154 aa20.25■□□□□ 0.83
LTBP4-208ENST00000593738 ZFYVE19Q96K21 471 aa20.25■□□□□ 0.83
LTBP4-208ENST00000593738 CYP2S1Q96SQ9 504 aa20.25■□□□□ 0.83
LTBP4-208ENST00000593738 KCNK16Q96T55 309 aa20.25■□□□□ 0.83
LTBP4-208ENST00000593738 NDRG2Q9UN36 371 aaKnown RBP20.25■□□□□ 0.83
LTBP4-208ENST00000593738 PATJQ8NI35 1801 aa20.25■□□□□ 0.83
LTBP4-208ENST00000593738 HELZP42694 1942 aaKnown RBP20.24■□□□□ 0.83
LTBP4-208ENST00000593738 C2orf78A6NCI8 922 aa20.24■□□□□ 0.83
LTBP4-208ENST00000593738 ZNF840PA6NDX5 716 aa20.24■□□□□ 0.83
LTBP4-208ENST00000593738 SPECC1L-ADORA2AF8WAN1 911 aa20.24■□□□□ 0.83
LTBP4-208ENST00000593738 CILPO75339 1184 aa20.24■□□□□ 0.83
LTBP4-208ENST00000593738 AP1G2O75843 785 aa20.24■□□□□ 0.83
LTBP4-208ENST00000593738 BMP6P22004 513 aa20.24■□□□□ 0.83
LTBP4-208ENST00000593738 TAF10Q12962 218 aa20.24■□□□□ 0.83
LTBP4-208ENST00000593738 PDGFRLQ15198 375 aa20.24■□□□□ 0.83
LTBP4-208ENST00000593738 DCAF17Q5H9S7 520 aaPredicted RBP20.24■□□□□ 0.83
LTBP4-208ENST00000593738 MAMSTRQ6ZN01 415 aa20.24■□□□□ 0.83
LTBP4-208ENST00000593738 ARL14EPQ8N8R7 260 aaPredicted RBP20.24■□□□□ 0.83
LTBP4-208ENST00000593738 SLC2A14Q8TDB8 520 aa20.24■□□□□ 0.83
LTBP4-208ENST00000593738 SEMA4DQ92854 862 aa20.24■□□□□ 0.83
LTBP4-208ENST00000593738 SLC22A12Q96S37 553 aa20.24■□□□□ 0.83
LTBP4-208ENST00000593738 PHOX2BQ99453 314 aa20.24■□□□□ 0.83
LTBP4-208ENST00000593738 HNRNPABQ99729 332 aaKnown RBP20.24■□□□□ 0.83
LTBP4-208ENST00000593738 CSNK1G1Q9HCP0 422 aa20.24■□□□□ 0.83
LTBP4-208ENST00000593738 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.24■□□□□ 0.834e-13■■■■■ 74.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms