RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 DUOXA2Q1HG44 320 aa17.47■□□□□ 0.39
LIG1-205ENST00000593425 TRAPPC11Q7Z392 1133 aa17.47■□□□□ 0.39
LIG1-205ENST00000593425 WDR49Q8IV35 697 aa17.47■□□□□ 0.39
LIG1-205ENST00000593425 MYCBPAPQ8TBZ2 947 aa17.47■□□□□ 0.39
LIG1-205ENST00000593425 MMS19Q96T76 1030 aa17.47■□□□□ 0.39
LIG1-205ENST00000593425 TPSD1Q9BZJ3 242 aa17.47■□□□□ 0.39
LIG1-205ENST00000593425 TRPM5Q9NZQ8 1165 aa17.47■□□□□ 0.39
LIG1-205ENST00000593425 INVSQ9Y283 1065 aa17.47■□□□□ 0.39
LIG1-205ENST00000593425 CACNA1BQ00975 2339 aa17.47■□□□□ 0.39
LIG1-205ENST00000593425 NUP205Q92621 2012 aa17.47■□□□□ 0.39
LIG1-205ENST00000593425 F8VP50 259 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 K7EQS6 105 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 LEFTY2O00292 366 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 CST3P01034 146 aaPredicted RBP17.46■□□□□ 0.39
LIG1-205ENST00000593425 ANXA13P27216 316 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 NASPP49321 788 aaPredicted RBP17.46■□□□□ 0.39
LIG1-205ENST00000593425 DGKEP52429 567 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 CACNA2D1P54289 1103 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 SEC13P55735 322 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 CREB5Q02930 508 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 MAPRE1Q15691 268 aaKnown RBP17.46■□□□□ 0.39
LIG1-205ENST00000593425 ELF2Q15723 593 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 MDH1BQ5I0G3 518 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 RDH13Q8NBN7 331 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 TSTD1Q8NFU3 115 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 USP33Q8TEY7 942 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 CHAMP1Q96JM3 812 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 TTLL2Q9BWV7 592 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 TRIM9Q9C026 710 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 RNF38Q9H0F5 515 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 TNMDQ9H2S6 317 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 TMEM30AQ9NV96 361 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 KBTBD4Q9NVX7 518 aa17.46■□□□□ 0.39
LIG1-205ENST00000593425 ZNF840PA6NDX5 716 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 SCAMP3O14828 347 aaKnown RBP17.45■□□□□ 0.38
LIG1-205ENST00000593425 TRIM66O15016 1216 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 TGFB1I1O43294 461 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 OLFM2O95897 454 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 CYP17A1P05093 508 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 DLATP10515 647 aaKnown RBP17.45■□□□□ 0.38
LIG1-205ENST00000593425 GBP1P32455 592 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 PDE6CP51160 858 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 SLC7A9P82251 487 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 C2orf27AQ580R0 203 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 RNF43Q68DV7 783 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 STXBP4Q6ZWJ1 553 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 EPM2AIP1Q7L775 607 aaPredicted RBP17.45■□□□□ 0.38
LIG1-205ENST00000593425 FILIP1Q7Z7B0 1213 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 CEP295NLQ96MC4 621 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 EDEM2Q9BV94 578 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 LSM14BQ9BX40 385 aaKnown RBP17.45■□□□□ 0.38
LIG1-205ENST00000593425 DPEP3Q9H4B8 488 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 FOXD4L1Q9NU39 408 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 ANGPTL2Q9UKU9 493 aa17.45■□□□□ 0.38
LIG1-205ENST00000593425 THADAQ6YHU6 1953 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 TPRP12270 2363 aaKnown RBP17.44■□□□□ 0.38
LIG1-205ENST00000593425 BCLAF3A2AJT9 711 aaKnown RBP17.44■□□□□ 0.38
LIG1-205ENST00000593425 EIF3DO15371 548 aaKnown RBP eCLIP17.44■□□□□ 0.38
LIG1-205ENST00000593425 RHOBTB1O94844 696 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 KCNK5O95279 499 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 CAVIN2O95810 425 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 OAS1P00973 400 aaKnown RBP17.44■□□□□ 0.38
LIG1-205ENST00000593425 PFKLP17858 780 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 BCKDHBP21953 392 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 NOP14P78316 857 aaKnown RBP17.44■□□□□ 0.38
LIG1-205ENST00000593425 MESP2Q0VG99 397 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 STK38Q15208 465 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 SNRNP35Q16560 246 aaKnown RBP17.44■□□□□ 0.38
LIG1-205ENST00000593425 PMS2CLQ68D20 193 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 ANO7Q6IWH7 933 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 HS2ST1Q7LGA3 356 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 RASSF3Q86WH2 238 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 SFTPA1Q8IWL2 248 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 CCDC33Q8N5R6 958 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 LINC00301Q8NCQ3 95 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 OR6B3Q8NGW1 331 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 ZNF507Q8TCN5 953 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 C8orf48Q96LL4 319 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 CGRRF1Q99675 332 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 ZNF518BQ9C0D4 1074 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 KIAA1586Q9HCI6 787 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 AGPAT3Q9NRZ7 376 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 SMPD4Q9NXE4 827 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 CPQQ9Y646 472 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 ACACBO00763 2458 aa17.44■□□□□ 0.38
LIG1-205ENST00000593425 TNRC6BQ9UPQ9 1833 aaKnown RBP17.43■□□□□ 0.38
LIG1-205ENST00000593425 CLIC2O15247 247 aa17.43■□□□□ 0.38
LIG1-205ENST00000593425 TACC1O75410 805 aa17.43■□□□□ 0.38
LIG1-205ENST00000593425 ABL1P00519 1130 aa17.43■□□□□ 0.38
LIG1-205ENST00000593425 CHRM1P11229 460 aaPredicted RBP17.43■□□□□ 0.38
LIG1-205ENST00000593425 HNRNPLP14866 589 aaKnown RBP eCLIP17.43■□□□□ 0.38
LIG1-205ENST00000593425 TNNI1P19237 187 aa17.43■□□□□ 0.38
LIG1-205ENST00000593425 GNL1P36915 607 aaPredicted RBP17.43■□□□□ 0.38
LIG1-205ENST00000593425 ASIC1P78348 528 aa17.43■□□□□ 0.38
LIG1-205ENST00000593425 CYP24A1Q07973 514 aa17.43■□□□□ 0.38
LIG1-205ENST00000593425 IFRD2Q12894 506 aaPredicted RBP17.43■□□□□ 0.38
LIG1-205ENST00000593425 TAF10Q12962 218 aa17.43■□□□□ 0.38
LIG1-205ENST00000593425 PSMD6Q15008 389 aa17.43■□□□□ 0.38
LIG1-205ENST00000593425 FAM26FQ5R3K3 315 aa17.43■□□□□ 0.38
LIG1-205ENST00000593425 C12orf40Q86WS4 652 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms