RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 MTF1Q14872 753 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 ZNF77Q15935 545 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 ZACNQ401N2 412 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 DGKKQ5KSL6 1271 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 MAMSTRQ6ZN01 415 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 SV2AQ7L0J3 742 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 SPEM1Q8N4L4 309 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 SUMF1Q8NBK3 374 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 HINFPQ9BQA5 517 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 TTLL2Q9BWV7 592 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 SDCBP2Q9H190 292 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 TMEM30AQ9NV96 361 aa13.94□□□□□ -0.18
PRKCSH-218ENST00000593053 IKBKBO14920 756 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 AKAP3O75969 853 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 P4HA1P13674 534 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 HDCP19113 662 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 PIK3CAP42336 1068 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 VAMP7P51809 220 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 NOP14P78316 857 aaKnown RBP13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 IFRD2Q12894 506 aaPredicted RBP13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 USP4Q13107 963 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 CCINQ13939 588 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 PDGFRLQ15198 375 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 SGSM1Q2NKQ1 1148 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 C1orf220Q5T0J3 134 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 GUF1Q8N442 669 aaKnown RBP13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 SH3RF2Q8TEC5 729 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 RUBCNQ92622 972 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 CCDC34Q96HJ3 373 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 MED10Q9BTT4 135 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 FAM126AQ9BYI3 521 aaPredicted RBP13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.93□□□□□ -0.181e-6■■□□□ 12.4
PRKCSH-218ENST00000593053 DUS2Q9NX74 493 aaKnown RBP13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 EHD2Q9NZN4 543 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 WNT6Q9Y6F9 365 aa13.93□□□□□ -0.18
PRKCSH-218ENST00000593053 ATP8B3O60423 1300 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 FAM186AA6NE01 2351 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 ZNF840PA6NDX5 716 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 LILRB5O75023 590 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 ABL1P00519 1130 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 HLA-DRAP01903 254 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 TRIM49P0CI25 452 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 TRIM49CP0CI26 452 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 IFNAR2P48551 515 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 PDE6CP51160 858 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 NRLP54845 237 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 TAF10Q12962 218 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 ORC1Q13415 861 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 NFIL3Q16649 462 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 SPOPLQ6IQ16 392 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 ACOT1Q86TX2 421 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 FAM35AQ86V20 835 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 FAM186BQ8IYM0 893 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 SMYD4Q8IYR2 804 aaPredicted RBP13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 CPA6Q8N4T0 437 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 DCLK2Q8N568 766 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 OSCP1Q8WVF1 389 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 TAF4BQ92750 862 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 CHFRQ96EP1 664 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 TNIP3Q96KP6 325 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 KCNK16Q96T55 309 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 ARHGAP26Q9UNA1 814 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 NUP210Q8TEM1 1887 aaPredicted RBP13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 GVINP1Q7Z2Y8 2422 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 WDR87Q6ZQQ6 2873 aa13.92□□□□□ -0.18
PRKCSH-218ENST00000593053 GOLGA6L4A6NEF3 574 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 TRDMT1O14717 391 aaKnown RBP13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 MAPK13O15264 365 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 ASS1P00966 412 aaKnown RBP13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 KRT13P13646 458 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 RPL13P26373 211 aaKnown RBP13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 PSMC2P35998 433 aaKnown RBP13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 ASPAP45381 313 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 PPP3CCP48454 512 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 GCLMP48507 274 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 NDST1P52848 882 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 AMPD2Q01433 879 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 GRSF1Q12849 480 aaKnown RBP eCLIP13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 ADAM9Q13443 819 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 PNOCQ13519 176 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 TMEM196Q5HYL7 178 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 NAIF1Q69YI7 327 aaPredicted RBP13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 FSTL4Q6MZW2 842 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 PAQR9Q6ZVX9 377 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 INTS8Q75QN2 995 aaKnown RBP13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 FMR1NBQ8N0W7 255 aaPredicted RBP13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 SYNPOQ8N3V7 929 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 ATP2A3Q93084 1043 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 SLITRK1Q96PX8 696 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 EPC1Q9H2F5 836 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 MMRN2Q9H8L6 949 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 ECT2Q9H8V3 914 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 C2orf42Q9NWW7 574 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 NCDNQ9UBB6 729 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 HMGXB4Q9UGU5 601 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 SMG5Q9UPR3 1016 aaKnown RBP13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 PATJQ8NI35 1801 aa13.91□□□□□ -0.18
PRKCSH-218ENST00000593053 CHURC1-FNTBB4DL54 471 aa13.9□□□□□ -0.18
PRKCSH-218ENST00000593053 K7ESF4 209 aa13.9□□□□□ -0.18
PRKCSH-218ENST00000593053 LEFTY2O00292 366 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms