RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 DDX23Q9BUQ8 820 aaKnown RBP17.42■□□□□ 0.38
CIRBP-233ENST00000591622 SRRTQ9BXP5 876 aaKnown RBP17.42■□□□□ 0.38
CIRBP-233ENST00000591622 DNAI2Q9GZS0 605 aa17.42■□□□□ 0.38
CIRBP-233ENST00000591622 SMG9Q9H0W8 520 aaKnown RBP17.42■□□□□ 0.38
CIRBP-233ENST00000591622 NUP62CLQ9H1M0 184 aa17.42■□□□□ 0.38
CIRBP-233ENST00000591622 FAM124BQ9H5Z6 455 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-233ENST00000591622 DMAP1Q9NPF5 467 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-233ENST00000591622 RWDD2AQ9UIY3 292 aa17.42■□□□□ 0.38
CIRBP-233ENST00000591622 PMM2O15305 246 aa17.41■□□□□ 0.38
CIRBP-233ENST00000591622 CHADO15335 359 aa17.41■□□□□ 0.38
CIRBP-233ENST00000591622 MARSP56192 900 aaKnown RBP17.41■□□□□ 0.38
CIRBP-233ENST00000591622 NUP93Q8N1F7 819 aa17.41■□□□□ 0.38
CIRBP-233ENST00000591622 BPIFB1Q8TDL5 484 aa17.41■□□□□ 0.38
CIRBP-233ENST00000591622 USP13Q92995 863 aaPredicted RBP17.41■□□□□ 0.38
CIRBP-233ENST00000591622 HEBP1Q9NRV9 189 aa17.41■□□□□ 0.38
CIRBP-233ENST00000591622 KRT82Q9NSB4 513 aa17.41■□□□□ 0.38
CIRBP-233ENST00000591622 CISHQ9NSE2 258 aa17.41■□□□□ 0.38
CIRBP-233ENST00000591622 FAM49BQ9NUQ9 324 aa17.41■□□□□ 0.38
CIRBP-233ENST00000591622 TDP1Q9NUW8 608 aa17.41■□□□□ 0.38
CIRBP-233ENST00000591622 TRPM5Q9NZQ8 1165 aa17.41■□□□□ 0.38
CIRBP-233ENST00000591622 KANSL1LA0AUZ9 987 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 ARNTLO00327 626 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 AP1G2O75843 785 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 FGFR1OPO95684 399 aaKnown RBP17.4■□□□□ 0.38
CIRBP-233ENST00000591622 PPP3CCP48454 512 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 ARHGAP29Q52LW3 1261 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 TRIM59Q8IWR1 403 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 PRSS33Q8NF86 280 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 CYFIP2Q96F07 1278 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 MED15Q96RN5 788 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 CYP2S1Q96SQ9 504 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 HNRNPABQ99729 332 aaKnown RBP17.4■□□□□ 0.38
CIRBP-233ENST00000591622 ARID3AQ99856 593 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 KIF9Q9HAQ2 790 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 CSNK1G1Q9HCP0 422 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 TRPC7Q9HCX4 862 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 CCL26Q9Y258 94 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 SIT1Q9Y3P8 196 aa17.4■□□□□ 0.38
CIRBP-233ENST00000591622 WDFY4Q6ZS81 3184 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 TRAV19A0A0A6YYK7 116 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 C2orf78A6NCI8 922 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 ZNF840PA6NDX5 716 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 TNFRSF10BO14763 440 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 P4HA2O15460 535 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 RTN3O95197 1032 aaPredicted RBP17.39■□□□□ 0.37
CIRBP-233ENST00000591622 CKMP06732 381 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 USP17L7P0C7H9 530 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 YWHAQP27348 245 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 TAF10Q12962 218 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 CUL2Q13617 745 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 ZNF268Q14587 947 aaPredicted RBP17.39■□□□□ 0.37
CIRBP-233ENST00000591622 ZNF394Q53GI3 561 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 TPRG1Q6ZUI0 275 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 ZMIZ2Q8NF64 920 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 PJA1Q8NG27 643 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 SLITRK1Q96PX8 696 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 SLC22A12Q96S37 553 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 SMOQ99835 787 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 FOXQ1Q9C009 403 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 THG1LQ9NWX6 298 aaKnown RBP17.39■□□□□ 0.37
CIRBP-233ENST00000591622 GCNT4Q9P109 453 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 KMT2EQ8IZD2 1858 aa17.39■□□□□ 0.37
CIRBP-233ENST00000591622 GALR2O43603 387 aaPredicted RBP17.38■□□□□ 0.37
CIRBP-233ENST00000591622 BEST1O76090 585 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 FAM200BP0CF97 657 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 CCDC192P0DO97 292 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 PFKLP17858 780 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 HDCP19113 662 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 CD72P21854 359 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 ADORA2BP29275 332 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 PDE6CP51160 858 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 MLLT6P55198 1093 aaPredicted RBP17.38■□□□□ 0.37
CIRBP-233ENST00000591622 MAP3K7CLP57077 242 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 PLCB2Q00722 1185 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 CETN1Q12798 172 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 IFRD2Q12894 506 aaPredicted RBP17.38■□□□□ 0.37
CIRBP-233ENST00000591622 ZNF852Q6ZMS4 543 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 ARL14EPQ8N8R7 260 aaPredicted RBP17.38■□□□□ 0.37
CIRBP-233ENST00000591622 SCAMP5Q8TAC9 235 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 CSGALNACT1Q8TDX6 532 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 TMEM176AQ96HP8 235 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 ZFYVE19Q96K21 471 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 HEXIM2Q96MH2 286 aaKnown RBP17.38■□□□□ 0.37
CIRBP-233ENST00000591622 NELL2Q99435 816 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 COMMD8Q9NX08 183 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 IL37Q9NZH6 218 aa17.38■□□□□ 0.37
CIRBP-233ENST00000591622 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.38■□□□□ 0.37
CIRBP-233ENST00000591622 SHISA7A6NL88 538 aa17.37■□□□□ 0.37
CIRBP-233ENST00000591622 GOLGA6L22H0YM25 854 aa17.37■□□□□ 0.37
CIRBP-233ENST00000591622 AFPP02771 609 aaKnown RBP17.37■□□□□ 0.37
CIRBP-233ENST00000591622 GLULP15104 373 aa17.37■□□□□ 0.37
CIRBP-233ENST00000591622 TBXAS1P24557 533 aaPredicted RBP17.37■□□□□ 0.37
CIRBP-233ENST00000591622 SLC5A3P53794 718 aa17.37■□□□□ 0.37
CIRBP-233ENST00000591622 RAD23BP54727 409 aa17.37■□□□□ 0.37
CIRBP-233ENST00000591622 PTPN5P54829 565 aa17.37■□□□□ 0.37
CIRBP-233ENST00000591622 KCNH2Q12809 1159 aa17.37■□□□□ 0.37
CIRBP-233ENST00000591622 TCF15Q12870 199 aa17.37■□□□□ 0.37
CIRBP-233ENST00000591622 LRMPQ12912 555 aa17.37■□□□□ 0.37
CIRBP-233ENST00000591622 UBXN2BQ14CS0 331 aa17.37■□□□□ 0.37
CIRBP-233ENST00000591622 DPCR1Q3MIW9 517 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms