RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 TCF3P15923 654 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 CASP1P29466 404 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 SNRPFP62306 86 aaKnown RBP23.23■■□□□ 1.31
DDX39A-215ENST00000590696 EHHADHQ08426 723 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 NR1H3Q13133 447 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 FOXD4L6Q3SYB3 417 aaPredicted RBP23.23■■□□□ 1.31
DDX39A-215ENST00000590696 FOXD4L3Q6VB84 417 aaPredicted RBP23.23■■□□□ 1.31
DDX39A-215ENST00000590696 CACNA2D4Q7Z3S7 1137 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 CAMKK1Q8N5S9 505 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 OR6B3Q8NGW1 331 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 RPLP0P6Q8NHW5 317 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 EZH1Q92800 747 aaPredicted RBP23.23■■□□□ 1.31
DDX39A-215ENST00000590696 BLZF1Q9H2G9 400 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 ARRDC1-AS1Q9H2J1 176 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 TRPM5Q9NZQ8 1165 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 ARHGAP26Q9UNA1 814 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 UBE4BO95155 1302 aa23.23■■□□□ 1.31
DDX39A-215ENST00000590696 TRIM66O15016 1216 aa23.22■■□□□ 1.31
DDX39A-215ENST00000590696 PDE6CP51160 858 aa23.22■■□□□ 1.31
DDX39A-215ENST00000590696 WDR72Q3MJ13 1102 aa23.22■■□□□ 1.31
DDX39A-215ENST00000590696 HS2ST1Q7LGA3 356 aa23.22■■□□□ 1.31
DDX39A-215ENST00000590696 KBTBD6Q86V97 674 aa23.22■■□□□ 1.31
DDX39A-215ENST00000590696 ZNF516Q92618 1163 aa23.22■■□□□ 1.31
DDX39A-215ENST00000590696 HHIPQ96QV1 700 aa23.22■■□□□ 1.31
DDX39A-215ENST00000590696 MAGEF1Q9HAY2 307 aa23.22■■□□□ 1.31
DDX39A-215ENST00000590696 F8VP50 259 aa23.21■■□□□ 1.31
DDX39A-215ENST00000590696 FOXD2O60548 495 aaPredicted RBP23.21■■□□□ 1.31
DDX39A-215ENST00000590696 FAM163BP0C2L3 166 aa23.21■■□□□ 1.31
DDX39A-215ENST00000590696 PTPN1P18031 435 aaKnown RBP23.21■■□□□ 1.31
DDX39A-215ENST00000590696 TNNC1P63316 161 aa23.21■■□□□ 1.31
DDX39A-215ENST00000590696 ZXDBP98169 803 aa23.21■■□□□ 1.31
DDX39A-215ENST00000590696 PSMD2Q13200 908 aa23.21■■□□□ 1.31
DDX39A-215ENST00000590696 LOXL4Q96JB6 756 aa23.21■■□□□ 1.31
DDX39A-215ENST00000590696 C8orf48Q96LL4 319 aa23.21■■□□□ 1.31
DDX39A-215ENST00000590696 TTLL2Q9BWV7 592 aa23.21■■□□□ 1.31
DDX39A-215ENST00000590696 SLC39A2Q9NP94 309 aa23.21■■□□□ 1.31
DDX39A-215ENST00000590696 EHD2Q9NZN4 543 aa23.21■■□□□ 1.31
DDX39A-215ENST00000590696 PTPRDP23468 1912 aa23.21■■□□□ 1.31
DDX39A-215ENST00000590696 NCOR2Q9Y618 2525 aa23.2■■□□□ 1.3
DDX39A-215ENST00000590696 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.2■■□□□ 1.3
DDX39A-215ENST00000590696 LEFTY2O00292 366 aa23.2■■□□□ 1.3
DDX39A-215ENST00000590696 PFKLP17858 780 aa23.2■■□□□ 1.3
DDX39A-215ENST00000590696 RAP1GAPP47736 663 aa23.2■■□□□ 1.3
DDX39A-215ENST00000590696 NOP14P78316 857 aaKnown RBP23.2■■□□□ 1.3
DDX39A-215ENST00000590696 TRPC3Q13507 836 aa23.2■■□□□ 1.3
DDX39A-215ENST00000590696 CCDC6Q16204 474 aa23.2■■□□□ 1.3
DDX39A-215ENST00000590696 SYT13Q7L8C5 426 aa23.2■■□□□ 1.3
DDX39A-215ENST00000590696 GZF1Q9H116 711 aaPredicted RBP23.2■■□□□ 1.3
DDX39A-215ENST00000590696 DPEP3Q9H4B8 488 aa23.2■■□□□ 1.3
DDX39A-215ENST00000590696 PCDHA7Q9UN72 937 aa23.2■■□□□ 1.3
DDX39A-215ENST00000590696 HELZP42694 1942 aaKnown RBP23.2■■□□□ 1.3
DDX39A-215ENST00000590696 ZNF840PA6NDX5 716 aa23.19■■□□□ 1.3
DDX39A-215ENST00000590696 AKAP3O75969 853 aa23.19■■□□□ 1.3
DDX39A-215ENST00000590696 EPN2O95208 641 aa23.19■■□□□ 1.3
DDX39A-215ENST00000590696 NFATC1O95644 943 aa23.19■■□□□ 1.3
DDX39A-215ENST00000590696 ABL1P00519 1130 aa23.19■■□□□ 1.3
DDX39A-215ENST00000590696 AFMP43652 599 aa23.19■■□□□ 1.3
DDX39A-215ENST00000590696 PPP3CCP48454 512 aa23.19■■□□□ 1.3
DDX39A-215ENST00000590696 CACNA2D1P54289 1103 aa23.19■■□□□ 1.3
DDX39A-215ENST00000590696 MYL6P60660 151 aa23.19■■□□□ 1.3
DDX39A-215ENST00000590696 CUL4BQ13620 913 aa23.19■■□□□ 1.3
DDX39A-215ENST00000590696 DMC1Q14565 340 aa23.19■■□□□ 1.3
DDX39A-215ENST00000590696 BMT2Q1RMZ1 405 aa23.19■■□□□ 1.3
DDX39A-215ENST00000590696 RNF38Q9H0F5 515 aa23.19■■□□□ 1.3
DDX39A-215ENST00000590696 FAM13BQ9NYF5 915 aa23.19■■□□□ 1.3
DDX39A-215ENST00000590696 CGNQ9P2M7 1197 aaKnown RBP23.19■■□□□ 1.3
DDX39A-215ENST00000590696 NXF1Q9UBU9 619 aaKnown RBP23.19■■□□□ 1.3
DDX39A-215ENST00000590696 PVALEFA0A1B0GWK0 134 aa23.18■■□□□ 1.3
DDX39A-215ENST00000590696 A8MXQ7 604 aa23.18■■□□□ 1.3
DDX39A-215ENST00000590696 STAU1O95793 577 aaKnown RBP23.18■■□□□ 1.3
DDX39A-215ENST00000590696 ZSCAN22P10073 491 aaPredicted RBP23.18■■□□□ 1.3
DDX39A-215ENST00000590696 ATICP31939 592 aa23.18■■□□□ 1.3
DDX39A-215ENST00000590696 ME1P48163 572 aa23.18■■□□□ 1.3
DDX39A-215ENST00000590696 SLC7A9P82251 487 aa23.18■■□□□ 1.3
DDX39A-215ENST00000590696 SF3A2Q15428 464 aaKnown RBP23.18■■□□□ 1.3
DDX39A-215ENST00000590696 KNOP1Q1ED39 458 aaKnown RBP23.18■■□□□ 1.3
DDX39A-215ENST00000590696 AASDHQ4L235 1098 aaPredicted RBP23.18■■□□□ 1.3
DDX39A-215ENST00000590696 PPM1JQ5JR12 505 aa23.18■■□□□ 1.3
DDX39A-215ENST00000590696 TDRD10Q5VZ19 366 aaKnown RBP23.18■■□□□ 1.3
DDX39A-215ENST00000590696 C12orf56Q8IXR9 622 aa23.18■■□□□ 1.3
DDX39A-215ENST00000590696 SNX21Q969T3 373 aa23.18■■□□□ 1.3
DDX39A-215ENST00000590696 ACDQ96AP0 544 aa23.18■■□□□ 1.3
DDX39A-215ENST00000590696 ZNF518BQ9C0D4 1074 aa23.18■■□□□ 1.3
DDX39A-215ENST00000590696 ELOVL4Q9GZR5 314 aa23.18■■□□□ 1.3
DDX39A-215ENST00000590696 XYLT2Q9H1B5 865 aa23.18■■□□□ 1.3
DDX39A-215ENST00000590696 TMEM30AQ9NV96 361 aa23.18■■□□□ 1.3
DDX39A-215ENST00000590696 EML5Q05BV3 1969 aa23.18■■□□□ 1.3
DDX39A-215ENST00000590696 CLDN5O00501 218 aa23.17■■□□□ 1.3
DDX39A-215ENST00000590696 EXOC3O60645 756 aa23.17■■□□□ 1.3
DDX39A-215ENST00000590696 PHACTR2O75167 634 aa23.17■■□□□ 1.3
DDX39A-215ENST00000590696 F13A1P00488 732 aa23.17■■□□□ 1.3
DDX39A-215ENST00000590696 ZNF806P0C7X5 589 aa23.17■■□□□ 1.3
DDX39A-215ENST00000590696 OPRD1P41143 372 aa23.17■■□□□ 1.3
DDX39A-215ENST00000590696 CASP4P49662 377 aa23.17■■□□□ 1.3
DDX39A-215ENST00000590696 IFRD2Q12894 506 aaPredicted RBP23.17■■□□□ 1.3
DDX39A-215ENST00000590696 TAF10Q12962 218 aa23.17■■□□□ 1.3
DDX39A-215ENST00000590696 RESP18Q5W5W9 173 aa23.17■■□□□ 1.3
DDX39A-215ENST00000590696 C12orf50Q8NA57 414 aaPredicted RBP23.17■■□□□ 1.3
DDX39A-215ENST00000590696 B3GALNT2Q8NCR0 500 aa23.17■■□□□ 1.3
DDX39A-215ENST00000590696 SYAP1Q96A49 352 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms