RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 SRFP11831 508 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 FCARP24071 287 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 PPP3CCP48454 512 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 CYP4F8P98187 520 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 MYL5Q02045 173 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 EXOC3L4Q17RC7 722 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 VWA3BQ502W6 1294 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 HSP90AA4PQ58FG1 418 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 STXBP5Q5T5C0 1151 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 CDKAL1Q5VV42 579 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 ENOSF1Q7L5Y1 443 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 NUP93Q8N1F7 819 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 HEXIM2Q96MH2 286 aaKnown RBP12.61□□□□□ -0.39
LIG3-213ENST00000590630 KCNK16Q96T55 309 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 KXD1Q9BQD3 176 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 CRACR2AQ9BSW2 395 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 NDST4Q9H3R1 872 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 PNPLA8Q9NP80 782 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 WDFY4Q6ZS81 3184 aa12.61□□□□□ -0.39
LIG3-213ENST00000590630 TNFRSF10BO14763 440 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 TADA3O75528 432 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 PAEPP09466 180 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 NPR3P17342 541 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 ACO1P21399 889 aaKnown RBP12.6□□□□□ -0.39
LIG3-213ENST00000590630 ADORA2BP29275 332 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 USP46P62068 366 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 SKOR2Q2VWA4 1001 aaPredicted RBP12.6□□□□□ -0.39
LIG3-213ENST00000590630 MIIPQ5JXC2 388 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 TMEM31Q5JXX7 168 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 PPP1R26Q5T8A7 1209 aaPredicted RBP12.6□□□□□ -0.39
LIG3-213ENST00000590630 ARHGAP17Q68EM7 881 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 SMYD5Q6GMV2 418 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 TANGO2Q6ICL3 276 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 PHLDB3Q6NSJ2 640 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 TMEM270Q6UE05 265 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 CLEC20AQ6ZU45 233 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 RRAGAQ7L523 313 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 MON1AQ86VX9 555 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 ARID3BQ8IVW6 561 aaPredicted RBP12.6□□□□□ -0.39
LIG3-213ENST00000590630 ARHGEF19Q8IW93 802 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 ST13P5Q8NFI4 369 aaPredicted RBP12.6□□□□□ -0.39
LIG3-213ENST00000590630 DEPDC1BQ8WUY9 529 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 OVCA2Q8WZ82 227 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 ASIC4Q96FT7 647 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 SLITRK1Q96PX8 696 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 SMOQ99835 787 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 RPP25Q9BUL9 199 aaKnown RBP12.6□□□□□ -0.39
LIG3-213ENST00000590630 SLC46A2Q9BY10 475 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 DUSP16Q9BY84 665 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 SMOC2Q9H3U7 446 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 C11orf16Q9NQ32 467 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 SLC2A4RGQ9NR83 387 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 FANCLQ9NW38 375 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 COMMD8Q9NX08 183 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 APEX2Q9UBZ4 518 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 KIAA1257Q9ULG3 409 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 NCANO14594 1321 aa12.6□□□□□ -0.39
LIG3-213ENST00000590630 KIF26AQ9ULI4 1882 aaPredicted RBP12.59□□□□□ -0.39
LIG3-213ENST00000590630 TMEM221A6NGB7 291 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 PRR33A8MZF0 331 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 M0R296 226 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 NARSO43776 548 aaKnown RBP12.59□□□□□ -0.39
LIG3-213ENST00000590630 BEST1O76090 585 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 TPM2P07951 284 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 PFKLP17858 780 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 PSMC3P17980 439 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 SLC9A1P19634 815 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 PON1P27169 355 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 YWHAQP27348 245 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 AVPR1AP37288 418 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 PDE6CP51160 858 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 SLC5A3P53794 718 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 MFAP3P55082 362 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 MAP3K7CLP57077 242 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 SLC8A3P57103 927 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 SGO2Q562F6 1265 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 TXNDC8Q6A555 127 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 CMTM8Q8IZV2 173 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 MAB21L3Q8N8X9 362 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 PDZD8Q8NEN9 1154 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 ZMIZ2Q8NF64 920 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 ANKRD20A12PQ8NF67 263 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 KAT5Q92993 513 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 KREMEN1Q96MU8 473 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 BPIFA3Q9BQP9 254 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 FBXO44Q9H4M3 255 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 UBE2TQ9NPD8 197 aaPredicted RBP12.59□□□□□ -0.39
LIG3-213ENST00000590630 OBP2AQ9NY56 170 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 IL37Q9NZH6 218 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 TRPM5Q9NZQ8 1165 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 WNT16Q9UBV4 365 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 CNTN6Q9UQ52 1028 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 PCDHB4Q9Y5E5 795 aa12.59□□□□□ -0.39
LIG3-213ENST00000590630 TICRRQ7Z2Z1 1910 aa12.58□□□□□ -0.39
LIG3-213ENST00000590630 TRAV19A0A0A6YYK7 116 aa12.58□□□□□ -0.4
LIG3-213ENST00000590630 FAM92AA1XBS5 289 aa12.58□□□□□ -0.4
LIG3-213ENST00000590630 ZNF840PA6NDX5 716 aa12.58□□□□□ -0.4
LIG3-213ENST00000590630 FAM86C2PA6NEL3 165 aa12.58□□□□□ -0.4
LIG3-213ENST00000590630 PES1O00541 588 aaKnown RBP12.58□□□□□ -0.4
LIG3-213ENST00000590630 DPYSL4O14531 572 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms