RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 GTPBP4Q9BZE4 634 aaKnown RBP11.98□□□□□ -0.49
SMAD4-211ENST00000590499 CRTAC1Q9NQ79 661 aa11.98□□□□□ -0.49
SMAD4-211ENST00000590499 SLC2A4RGQ9NR83 387 aa11.98□□□□□ -0.49
SMAD4-211ENST00000590499 HOOK1Q9UJC3 728 aaKnown RBP11.98□□□□□ -0.49
SMAD4-211ENST00000590499 GTF3C4Q9UKN8 822 aa11.98□□□□□ -0.49
SMAD4-211ENST00000590499 CDH9Q9ULB4 789 aa11.98□□□□□ -0.49
SMAD4-211ENST00000590499 ZNF638Q14966 1978 aaKnown RBP11.98□□□□□ -0.49
SMAD4-211ENST00000590499 ANAPC1Q9H1A4 1944 aa11.98□□□□□ -0.49
SMAD4-211ENST00000590499 COL4A2P08572 1712 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 NCANO14594 1321 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 PHACTR2O75167 634 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 ASS1P00966 412 aaKnown RBP11.97□□□□□ -0.49
SMAD4-211ENST00000590499 TRIM49P0CI25 452 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 TRIM49CP0CI26 452 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 HMGA1P17096 107 aaKnown RBP11.97□□□□□ -0.49
SMAD4-211ENST00000590499 GJA1P17302 382 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 CYP2F1P24903 491 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 PSMC2P35998 433 aaKnown RBP11.97□□□□□ -0.49
SMAD4-211ENST00000590499 MAGEA11P43364 429 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 GPR15P49685 360 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 PSMC1P62191 440 aaKnown RBP11.97□□□□□ -0.49
SMAD4-211ENST00000590499 UBE2HP62256 183 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 TNNC1P63316 161 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 PTK2Q05397 1052 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 PPP3CAQ08209 521 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 TEAD2Q15562 447 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 ZNF699Q32M78 642 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 FAM78AQ5JUQ0 283 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 ANKRD40Q6AI12 368 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 ITIH5Q86UX2 942 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 CCDC116Q8IYX3 515 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 MYLPFQ96A32 169 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 ASB16Q96NS5 453 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 CNTNAP3BQ96NU0 1288 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 MMS19Q96T76 1030 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 KXD1Q9BQD3 176 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 PI4K2AQ9BTU6 479 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 CNTNAP3Q9BZ76 1288 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 SMYD3Q9H7B4 428 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 TRPV4Q9HBA0 871 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 WNT16Q9UBV4 365 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 KIF26AQ9ULI4 1882 aaPredicted RBP11.97□□□□□ -0.49
SMAD4-211ENST00000590499 VPS13AQ96RL7 3174 aa11.97□□□□□ -0.49
SMAD4-211ENST00000590499 A0A1W2PRU2 124 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 TRIM49BA6NDI0 452 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 HLA-DRAP01903 254 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 PDGFRBP09619 1106 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 NPR3P17342 541 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 GNL1P36915 607 aaPredicted RBP11.96□□□□□ -0.49
SMAD4-211ENST00000590499 VCPP55072 806 aaKnown RBP11.96□□□□□ -0.49
SMAD4-211ENST00000590499 LRRC63Q05C16 580 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 MORC3Q14149 939 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 VEPH1Q14D04 833 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 ZNF667Q5HYK9 610 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 STXBP5Q5T5C0 1151 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 CWF19L1Q69YN2 538 aaKnown RBP11.96□□□□□ -0.49
SMAD4-211ENST00000590499 TANGO2Q6ICL3 276 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 CLEC17AQ6ZS10 378 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 TMEM150AQ86TG1 271 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 MYCBPAPQ8TBZ2 947 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 GPR152Q8TDT2 470 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 GIPC2Q8TF65 315 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 TAF4BQ92750 862 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 SMARCD2Q92925 531 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 ELSPBP1Q96BH3 223 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 ELMO3Q96BJ8 720 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 EEF2KMTQ96G04 330 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 OCSTAMPQ9BR26 566 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 PLA2G2FQ9BZM2 168 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 SDCBP2Q9H190 292 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 DPEP3Q9H4B8 488 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 HCN4Q9Y3Q4 1203 aa11.96□□□□□ -0.49
SMAD4-211ENST00000590499 COL4A3Q01955 1670 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 MYO15AQ9UKN7 3530 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 KRBA1A5PL33 1030 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 CETN3O15182 167 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 SLC16A3O15427 465 aaKnown RBP11.95□□□□□ -0.5
SMAD4-211ENST00000590499 NOL4O94818 638 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 FGF19O95750 216 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 BMP2P12643 396 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 KRT13P13646 458 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 CCNE1P24864 410 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 GABRR2P28476 465 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 GTF2H1P32780 548 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 ASPAP45381 313 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 RAP1GAPP47736 663 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 GCLMP48507 274 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 CDH8P55286 799 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 GPC5P78333 572 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 FKBP3Q00688 224 aaKnown RBP11.95□□□□□ -0.5
SMAD4-211ENST00000590499 MAPRE1Q15691 268 aaKnown RBP11.95□□□□□ -0.5
SMAD4-211ENST00000590499 DDR2Q16832 855 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 SGSM1Q2NKQ1 1148 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 SDHAF4Q5VUM1 108 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 SPOPLQ6IQ16 392 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 FOXR2Q6PJQ5 311 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 C4orf50Q6ZRC1 276 aa11.95□□□□□ -0.5
SMAD4-211ENST00000590499 SPATA2LQ8IUW3 424 aaPredicted RBP11.95□□□□□ -0.5
SMAD4-211ENST00000590499 SUGP1Q8IWZ8 645 aaKnown RBP11.95□□□□□ -0.5
SMAD4-211ENST00000590499 STKLD1Q8NE28 680 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms