RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 TNFRSF10BO14763 440 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 XPO1O14980 1071 aaKnown RBP12.75□□□□□ -0.37
APOC1-206ENST00000590334 SOAT2O75908 522 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 LSM8O95777 96 aaKnown RBP12.75□□□□□ -0.37
APOC1-206ENST00000590334 MMEP08473 750 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 HOXB8P17481 243 aaPredicted RBP12.75□□□□□ -0.37
APOC1-206ENST00000590334 LTBRP36941 435 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 GRIK1P39086 918 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 PLA2G4AP47712 749 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 RPL34P49207 117 aaKnown RBP12.75□□□□□ -0.37
APOC1-206ENST00000590334 MAP3K7CLP57077 242 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 SLC8A3P57103 927 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 CDK17Q00537 523 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 FMO1Q01740 532 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 PDE4CQ08493 712 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 KLHL30Q0D2K2 578 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 TWF1Q12792 350 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 DDR2Q16832 855 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 PPM1LQ5SGD2 360 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 ANKRD54Q6NXT1 300 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 DENND1BQ6P3S1 775 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 WDTC1Q8N5D0 677 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 STK32AQ8WU08 396 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 KCTD13Q8WZ19 329 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 MSLNLQ96KJ4 702 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 PANX2Q96RD6 677 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 AGPAT1Q99943 283 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 HAUS4Q9H6D7 363 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 SFXN1Q9H9B4 322 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 CYLDQ9NQC7 956 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 IL37Q9NZH6 218 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 CLEC1BQ9P126 229 aa12.75□□□□□ -0.37
APOC1-206ENST00000590334 COL6A3P12111 3177 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.74□□□□□ -0.37
APOC1-206ENST00000590334 TBX10O75333 385 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 RFPL2O75678 378 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 LRG1P02750 347 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 FECHP22830 423 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 ANXA13P27216 316 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 GPR15P49685 360 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 EPHB3P54753 998 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 GOLGA8FQ08AF8 430 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 GOLGA8DPQ0D2H9 430 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 TSR1Q2NL82 804 aaKnown RBP12.74□□□□□ -0.37
APOC1-206ENST00000590334 RAB41Q5JT25 222 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 TAF3Q5VWG9 929 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 SYCE2Q6PIF2 218 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 TRIM72Q6ZMU5 477 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 ZNF571Q7Z3V5 609 aaPredicted RBP12.74□□□□□ -0.37
APOC1-206ENST00000590334 GPIHBP1Q8IV16 184 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 SCN4BQ8IWT1 228 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 UBA3Q8TBC4 463 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 SECISBP2LQ93073 1101 aaKnown RBP12.74□□□□□ -0.37
APOC1-206ENST00000590334 PSMG2Q969U7 264 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 ZNF707Q96C28 371 aaPredicted RBP12.74□□□□□ -0.37
APOC1-206ENST00000590334 TRMT2BQ96GJ1 504 aaKnown RBP12.74□□□□□ -0.37
APOC1-206ENST00000590334 TTLL2Q9BWV7 592 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 PRKD2Q9BZL6 878 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 ZNHIT6Q9NWK9 470 aaKnown RBP12.74□□□□□ -0.37
APOC1-206ENST00000590334 COMMD8Q9NX08 183 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 CLDND1Q9NY35 253 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 ARHGAP20Q9P2F6 1191 aa12.74□□□□□ -0.37
APOC1-206ENST00000590334 HELZP42694 1942 aaKnown RBP12.73□□□□□ -0.37
APOC1-206ENST00000590334 CCDC195A0A1B0GUA6 201 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 SSU72P8A0A1W2PR75 194 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 FAM92AA1XBS5 289 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 SLC38A8A6NNN8 435 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 TULP2O00295 520 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 XYLBO75191 536 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 CYP1A1P04798 512 aaPredicted RBP12.73□□□□□ -0.37
APOC1-206ENST00000590334 CSH1P0DML2 217 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 CSH2P0DML3 217 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 SKILP12757 684 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 UNGP13051 313 aaPredicted RBP12.73□□□□□ -0.37
APOC1-206ENST00000590334 HMGA1P17096 107 aaKnown RBP12.73□□□□□ -0.37
APOC1-206ENST00000590334 SSTR3P32745 418 aaPredicted RBP12.73□□□□□ -0.37
APOC1-206ENST00000590334 NOMO3P69849 1222 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 DLX2Q07687 328 aaPredicted RBP12.73□□□□□ -0.37
APOC1-206ENST00000590334 MAPK8IP2Q13387 824 aaPredicted RBP12.73□□□□□ -0.37
APOC1-206ENST00000590334 VEPH1Q14D04 833 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 PMF1Q6P1K2 205 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 ITIH5Q86UX2 942 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 PIGZQ86VD9 579 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 NUP93Q8N1F7 819 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 MICALL1Q8N3F8 863 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 SPC24Q8NBT2 197 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 TMEM35BQ8NCS4 154 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 SLC30A5Q8TAD4 765 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 PDLIM2Q96JY6 352 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 HSFY1Q96LI6 401 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 MYRFLQ96LU7 910 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 SLC4A5Q9BY07 1137 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 S1PR5Q9H228 398 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 EHD2Q9NZN4 543 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 CYTH4Q9UIA0 394 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 CEP83Q9Y592 693 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 USP3Q9Y6I4 520 aa12.73□□□□□ -0.37
APOC1-206ENST00000590334 DOCK6Q96HP0 2047 aa12.72□□□□□ -0.37
APOC1-206ENST00000590334 NUP210Q8TEM1 1887 aaPredicted RBP12.72□□□□□ -0.37
APOC1-206ENST00000590334 GOLGA6L6A8MZA4 724 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms