RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 TMEM30AQ9NV96 361 aa22.57■■□□□ 1.2
ATG4D-212ENST00000590096 LGALS16A8MUM7 142 aa22.56■■□□□ 1.2
ATG4D-212ENST00000590096 GOLGA6L19H0YKK7 550 aa22.56■■□□□ 1.2
ATG4D-212ENST00000590096 SLC8A3P57103 927 aa22.56■■□□□ 1.2
ATG4D-212ENST00000590096 UBXN1Q04323 297 aa22.56■■□□□ 1.2
ATG4D-212ENST00000590096 KCNMA1Q12791 1236 aa22.56■■□□□ 1.2
ATG4D-212ENST00000590096 ARHGAP17Q68EM7 881 aa22.56■■□□□ 1.2
ATG4D-212ENST00000590096 LUZP1Q86V48 1076 aa22.56■■□□□ 1.2
ATG4D-212ENST00000590096 NUP93Q8N1F7 819 aa22.56■■□□□ 1.2
ATG4D-212ENST00000590096 MYRFLQ96LU7 910 aa22.56■■□□□ 1.2
ATG4D-212ENST00000590096 SMOQ99835 787 aa22.56■■□□□ 1.2
ATG4D-212ENST00000590096 GPR88Q9GZN0 384 aa22.56■■□□□ 1.2
ATG4D-212ENST00000590096 TSPY26PQ9H489 355 aa22.56■■□□□ 1.2
ATG4D-212ENST00000590096 IL21Q9HBE4 155 aa22.56■■□□□ 1.2
ATG4D-212ENST00000590096 CSNK1G1Q9HCP0 422 aa22.56■■□□□ 1.2
ATG4D-212ENST00000590096 DNAJC12Q9UKB3 198 aa22.56■■□□□ 1.2
ATG4D-212ENST00000590096 GREB1Q4ZG55 1949 aa22.55■■□□□ 1.2
ATG4D-212ENST00000590096 MOSPD3O75425 235 aa22.55■■□□□ 1.2
ATG4D-212ENST00000590096 RTN3O95197 1032 aaPredicted RBP22.55■■□□□ 1.2
ATG4D-212ENST00000590096 NPR3P17342 541 aa22.55■■□□□ 1.2
ATG4D-212ENST00000590096 RFX1P22670 979 aa22.55■■□□□ 1.2
ATG4D-212ENST00000590096 IFRD2Q12894 506 aaPredicted RBP22.55■■□□□ 1.2
ATG4D-212ENST00000590096 FILIP1LQ4L180 1135 aa22.55■■□□□ 1.2
ATG4D-212ENST00000590096 LRSAM1Q6UWE0 723 aa22.55■■□□□ 1.2
ATG4D-212ENST00000590096 CLEC20AQ6ZU45 233 aa22.55■■□□□ 1.2
ATG4D-212ENST00000590096 PCMTD1Q96MG8 357 aaPredicted RBP22.55■■□□□ 1.2
ATG4D-212ENST00000590096 DUSP16Q9BY84 665 aa22.55■■□□□ 1.2
ATG4D-212ENST00000590096 HESX1Q9UBX0 185 aa22.55■■□□□ 1.2
ATG4D-212ENST00000590096 BEST1O76090 585 aa22.54■■□□□ 1.2
ATG4D-212ENST00000590096 F11P03951 625 aa22.54■■□□□ 1.2
ATG4D-212ENST00000590096 USP8P40818 1118 aa22.54■■□□□ 1.2
ATG4D-212ENST00000590096 ZNF132P52740 706 aa22.54■■□□□ 1.2
ATG4D-212ENST00000590096 STILQ15468 1287 aa22.54■■□□□ 1.2
ATG4D-212ENST00000590096 GOLGA7BQ2TAP0 167 aa22.54■■□□□ 1.2
ATG4D-212ENST00000590096 KLHDC7AQ5VTJ3 777 aa22.54■■□□□ 1.2
ATG4D-212ENST00000590096 MTSS1LQ765P7 747 aa22.54■■□□□ 1.2
ATG4D-212ENST00000590096 ZMIZ2Q8NF64 920 aa22.54■■□□□ 1.2
ATG4D-212ENST00000590096 MRPS31Q92665 395 aaKnown RBP22.54■■□□□ 1.2
ATG4D-212ENST00000590096 TTLL2Q9BWV7 592 aa22.54■■□□□ 1.2
ATG4D-212ENST00000590096 PLCB1Q9NQ66 1216 aa22.54■■□□□ 1.2
ATG4D-212ENST00000590096 IGSF9Q9P2J2 1179 aa22.54■■□□□ 1.2
ATG4D-212ENST00000590096 TSPAN16Q9UKR8 245 aa22.54■■□□□ 1.2
ATG4D-212ENST00000590096 CNTN6Q9UQ52 1028 aa22.54■■□□□ 1.2
ATG4D-212ENST00000590096 RNF225M0QZC1 329 aaPredicted RBP22.53■■□□□ 1.2
ATG4D-212ENST00000590096 NRG2O14511 850 aaPredicted RBP22.53■■□□□ 1.2
ATG4D-212ENST00000590096 ASGR2P07307 311 aa22.53■■□□□ 1.2
ATG4D-212ENST00000590096 YWHAQP27348 245 aa22.53■■□□□ 1.2
ATG4D-212ENST00000590096 SLC5A3P53794 718 aa22.53■■□□□ 1.2
ATG4D-212ENST00000590096 USP46P62068 366 aa22.53■■□□□ 1.2
ATG4D-212ENST00000590096 CYP4F8P98187 520 aa22.53■■□□□ 1.2
ATG4D-212ENST00000590096 RAPGEF1Q13905 1077 aa22.53■■□□□ 1.2
ATG4D-212ENST00000590096 GPR158Q5T848 1215 aa22.53■■□□□ 1.2
ATG4D-212ENST00000590096 SMYD5Q6GMV2 418 aa22.53■■□□□ 1.2
ATG4D-212ENST00000590096 APTXQ7Z2E3 356 aaKnown RBP22.53■■□□□ 1.2
ATG4D-212ENST00000590096 ANKRD52Q8NB46 1076 aa22.53■■□□□ 1.2
ATG4D-212ENST00000590096 SHC3Q92529 594 aa22.53■■□□□ 1.2
ATG4D-212ENST00000590096 NXPE3Q969Y0 559 aa22.53■■□□□ 1.2
ATG4D-212ENST00000590096 SLITRK1Q96PX8 696 aa22.53■■□□□ 1.2
ATG4D-212ENST00000590096 KCNK12Q9HB15 430 aa22.53■■□□□ 1.2
ATG4D-212ENST00000590096 PNPLA8Q9NP80 782 aa22.53■■□□□ 1.2
ATG4D-212ENST00000590096 ZMYM5Q9UJ78 669 aa22.53■■□□□ 1.2
ATG4D-212ENST00000590096 O00370 1275 aa22.52■■□□□ 1.2
ATG4D-212ENST00000590096 SERPINC1P01008 464 aa22.52■■□□□ 1.2
ATG4D-212ENST00000590096 UCHL3P15374 230 aa22.52■■□□□ 1.2
ATG4D-212ENST00000590096 BRD2P25440 801 aaKnown RBP22.52■■□□□ 1.2
ATG4D-212ENST00000590096 DDX6P26196 483 aaKnown RBP eCLIP22.52■■□□□ 1.2
ATG4D-212ENST00000590096 BCAT1P54687 386 aa22.52■■□□□ 1.2
ATG4D-212ENST00000590096 SYCP1Q15431 976 aa22.52■■□□□ 1.2
ATG4D-212ENST00000590096 STXBP5Q5T5C0 1151 aa22.52■■□□□ 1.2
ATG4D-212ENST00000590096 DPY19L2P1Q6NXN4 242 aa22.52■■□□□ 1.2
ATG4D-212ENST00000590096 TMEM150AQ86TG1 271 aa22.52■■□□□ 1.2
ATG4D-212ENST00000590096 TASP1Q9H6P5 420 aa22.52■■□□□ 1.2
ATG4D-212ENST00000590096 FAM207AQ9NSI2 230 aaPredicted RBP22.52■■□□□ 1.2
ATG4D-212ENST00000590096 COMMD8Q9NX08 183 aa22.52■■□□□ 1.2
ATG4D-212ENST00000590096 TRPM5Q9NZQ8 1165 aa22.52■■□□□ 1.2
ATG4D-212ENST00000590096 MUTYHQ9UIF7 546 aa22.52■■□□□ 1.2
ATG4D-212ENST00000590096 AJAP1Q9UKB5 411 aaPredicted RBP22.52■■□□□ 1.2
ATG4D-212ENST00000590096 FHOD1Q9Y613 1164 aa22.52■■□□□ 1.2
ATG4D-212ENST00000590096 ZNF638Q14966 1978 aaKnown RBP22.52■■□□□ 1.2
ATG4D-212ENST00000590096 PATJQ8NI35 1801 aa22.52■■□□□ 1.2
ATG4D-212ENST00000590096 ANHXE9PGG2 379 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 TNFRSF10BO14763 440 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 GNA15P30679 374 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 PPP3CCP48454 512 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 BST2Q10589 180 aaKnown RBP22.51■■□□□ 1.19
ATG4D-212ENST00000590096 HTR4Q13639 388 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 PARM1Q6UWI2 310 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 LCLAT1Q6UWP7 414 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 SCAMP5Q8TAC9 235 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 ZSCAN18Q8TBC5 510 aaPredicted RBP22.51■■□□□ 1.19
ATG4D-212ENST00000590096 TFAP2BQ92481 460 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 SMARCD2Q92925 531 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 FBXO32Q969P5 355 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 ZSWIM3Q96MP5 696 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 ERGIC2Q96RQ1 377 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 FBXO44Q9H4M3 255 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 SIK3Q9Y2K2 1263 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 DAAM1Q9Y4D1 1078 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 NUMBLQ9Y6R0 609 aa22.51■■□□□ 1.19
ATG4D-212ENST00000590096 OBSL1O75147 1896 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms