RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, human

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKCSH-210	ENST00000589990	ATXN3	P54252	364 aa	Predicted RBP	13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	MRPS21	P82921	87 aa	Known RBP	13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	TSPY1	Q01534	308 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	GFPT1	Q06210	699 aa	Predicted RBP	13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	SMARCB1	Q12824	385 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	HYI	Q5T013	277 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	SLC41A1	Q8IVJ1	513 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	CCDC83	Q8IWF9	413 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	SCN4B	Q8IWT1	228 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	CD302	Q8IX05	232 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	PGBD3	Q8N328	593 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	ZSWIM2	Q8NEG5	633 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	FBXO18	Q8NFZ0	1043 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	LRIG1	Q96JA1	1093 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	SPACA7	Q96KW9	195 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	TSPAN18	Q96SJ8	248 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	FIZ1	Q96SL8	496 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	CD93	Q9NPY3	652 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	DDX43	Q9NXZ2	648 aa	Known RBP	13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	UXT	Q9UBK9	157 aa	Predicted RBP	13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	HCN2	Q9UL51	889 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	DERA	Q9Y315	318 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	C2CD2	Q9Y426	696 aa		13.72	□□□□□ -0.21
PRKCSH-210	ENST00000589990	ATP2C2	O75185	946 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	GJB3	O75712	270 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	KAT7	O95251	611 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	SERPINF2	P08697	491 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	PAX3	P23760	479 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	RPL10A	P62906	217 aa	Known RBP	13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	ATP2C1	P98194	919 aa	Predicted RBP	13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	RPL6	Q02878	288 aa	Known RBP	13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	DHX8	Q14562	1220 aa	Known RBP	13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	KCNB1	Q14721	858 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	DHCR24	Q15392	516 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	TRIP6	Q15654	476 aa	Known RBP	13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	NFE2	Q16621	373 aa	Predicted RBP	13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	KYAT1	Q16773	422 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	DUOXA1	Q1HG43	343 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	ZNF423	Q2M1K9	1284 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	INTS6L	Q5JSJ4	861 aa	Known RBP	13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	RHBDF2	Q6PJF5	856 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	CCNI2	Q6ZMN8	369 aa	Predicted RBP	13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	SLCO6A1	Q86UG4	719 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	ADGRG2	Q8IZP9	1017 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	LEO1	Q8WVC0	666 aa	Predicted RBP	13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	KCNN1	Q92952	543 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	RAB34	Q9BZG1	259 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	RNF38	Q9H0F5	515 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	CCDC86	Q9H6F5	360 aa	Known RBP	13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	SMPD4	Q9NXE4	827 aa		13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	LARS	Q9P2J5	1176 aa	Known RBP	13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	NOL7	Q9UMY1	257 aa	Known RBP	13.71	□□□□□ -0.21
PRKCSH-210	ENST00000589990	TULP1	O00294	542 aa	Predicted RBP	13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	ARHGAP33	O14559	1287 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	PRB1	P04280	392 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	TCF3	P15923	654 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	GABRG2	P18507	467 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	POLR2B	P30876	1174 aa	Known RBP	13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	WAS	P42768	502 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	NEK4	P51957	841 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	ZNF33A	Q06730	810 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	GNL2	Q13823	731 aa	Known RBP	13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	SV2C	Q496J9	727 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	TMEM119	Q4V9L6	283 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	DTHD1	Q6ZMT9	781 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	MIB1	Q86YT6	1006 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	PHTF2	Q8N3S3	785 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	MYCT1	Q8N699	235 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	CCDC26	Q8TAB7	109 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	ADAM32	Q8TC27	787 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	ADAMTS14	Q8WXS8	1223 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	PNKP	Q96T60	521 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	ASB7	Q9H672	318 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	ABCB6	Q9NP58	842 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	POLM	Q9NP87	494 aa	Predicted RBP	13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	CALCOCO1	Q9P1Z2	691 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	STK24	Q9Y6E0	443 aa		13.7	□□□□□ -0.22
PRKCSH-210	ENST00000589990	URB1	O60287	2271 aa	Known RBP	13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	TRIM24	O15164	1050 aa		13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	ITGB3	P05106	788 aa		13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	ZNF131	P52739	623 aa		13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	ANAPC15	P60006	121 aa		13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	ADAL	Q6DHV7	355 aa		13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	GPBP1	Q86WP2	473 aa		13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	CXorf38	Q8TB03	319 aa		13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	SPATA18	Q8TC71	538 aa		13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	ACBD6	Q9BR61	282 aa		13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	SLC6A17	Q9H1V8	727 aa		13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	ARHGEF4	Q9NR80	690 aa		13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	DNAAF2	Q9NVR5	837 aa	Known RBP	13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	KCNG1	Q9UIX4	513 aa		13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	AGAP1	Q9UPQ3	857 aa		13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990	CPQ	Q9Y646	472 aa		13.69	□□□□□ -0.22
PRKCSH-210	ENST00000589990		A0A0A0MRY4	1105 aa		13.68	□□□□□ -0.22
PRKCSH-210	ENST00000589990	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.68	□□□□□ -0.22
PRKCSH-210	ENST00000589990	MYMK	A6NI61	221 aa		13.68	□□□□□ -0.22
PRKCSH-210	ENST00000589990	CYSRT1	A8MQ03	144 aa		13.68	□□□□□ -0.22
PRKCSH-210	ENST00000589990		H0YCG3	227 aa		13.68	□□□□□ -0.22

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