RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 OTOL1A6NHN0 477 aaPredicted RBP15.3■□□□□ 0.04
MBD1-220ENST00000589758 CHURC1-FNTBB4DL54 471 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 K7ESF4 209 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 PDXKO00764 312 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 KIF20AO95235 890 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 ARSAP15289 507 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 DRD1P21728 446 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 SDHBP21912 280 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 IFNAR2P48551 515 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 FNTBP49356 437 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 USP4Q13107 963 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 NR1H3Q13133 447 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 BIRC3Q13489 604 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 PUM1Q14671 1186 aaKnown RBP eCLIP15.3■□□□□ 0.04
MBD1-220ENST00000589758 ARL14EPQ8N8R7 260 aaPredicted RBP15.3■□□□□ 0.04
MBD1-220ENST00000589758 B3GALNT2Q8NCR0 500 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 KIAA0895Q8NCT3 520 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 RIN3Q8TB24 985 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 ATP2A3Q93084 1043 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 CCDC47Q96A33 483 aaKnown RBP15.3■□□□□ 0.04
MBD1-220ENST00000589758 RMDN1Q96DB5 314 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 VPS13AQ96RL7 3174 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 SLC22A12Q96S37 553 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 ECT2Q9H8V3 914 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 ARHGAP26Q9UNA1 814 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 NME7Q9Y5B8 376 aa15.3■□□□□ 0.04
MBD1-220ENST00000589758 GVINP1Q7Z2Y8 2422 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 PTPRDP23468 1912 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 ANAPC1Q9H1A4 1944 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 ATP8B3O60423 1300 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 C2orf78A6NCI8 922 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 GOLGA6L4A6NEF3 574 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 LRRIQ3A6PVS8 624 aaPredicted RBP15.29■□□□□ 0.04
MBD1-220ENST00000589758 F8VP50 259 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 CLSTN1O94985 981 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 C4BPAP04003 597 aaKnown RBP15.29■□□□□ 0.04
MBD1-220ENST00000589758 GJA4P35212 333 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 SYKP43405 635 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 CASP4P49662 377 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 NCOA4Q13772 614 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 SIM2Q14190 667 aaPredicted RBP15.29■□□□□ 0.04
MBD1-220ENST00000589758 ZNF699Q32M78 642 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 FBXO43Q4G163 708 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 ZNF667Q5HYK9 610 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 TDRD10Q5VZ19 366 aaKnown RBP15.29■□□□□ 0.04
MBD1-220ENST00000589758 FSTL4Q6MZW2 842 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 PRR23BQ6ZRT6 265 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 KIAA1958Q8N8K9 716 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 TTC16Q8NEE8 873 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 SH3RF2Q8TEC5 729 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 TNIP3Q96KP6 325 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 P2RY13Q9BPV8 354 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 KCTD10Q9H3F6 313 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 HPSEQ9Y251 543 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 OTOGLQ3ZCN5 2332 aa15.29■□□□□ 0.04
MBD1-220ENST00000589758 EP300Q09472 2414 aaPredicted RBP15.28■□□□□ 0.04
MBD1-220ENST00000589758 CCDC163A0A0D9SF12 145 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 PRR5-ARHGAP8B1AHC4 643 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 RPN1P04843 607 aaKnown RBP15.28■□□□□ 0.04
MBD1-220ENST00000589758 P4HA1P13674 534 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 GALK1P51570 392 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 NDUFA8P51970 172 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 USP46P62068 366 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 ARHGAP8P85298 464 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 DMWDQ09019 674 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 EML3Q32P44 896 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 WDR5BQ86VZ2 330 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 NUP93Q8N1F7 819 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 PLEKHO2Q8TD55 490 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 TMC2Q8TDI7 906 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 CHFRQ96EP1 664 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 SLITRK1Q96PX8 696 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 GOLPH3LQ9H4A5 285 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 DPEP3Q9H4B8 488 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 DLL3Q9NYJ7 618 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 SLC8A2Q9UPR5 921 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 FRMD4BQ9Y2L6 1034 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 WNT6Q9Y6F9 365 aa15.28■□□□□ 0.04
MBD1-220ENST00000589758 FAM237AA0A1B0GTK4 181 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 A0A1W2PQ27 194 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 A0A1W2PQ64 194 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 A0A1W2PQD8 194 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 ZNF840PA6NDX5 716 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 IKBKBO14920 756 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 HRO43593 1189 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 CALUO43852 315 aaPredicted RBP15.27■□□□□ 0.04
MBD1-220ENST00000589758 LRP3O75074 770 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 RTN3O95197 1032 aaPredicted RBP15.27■□□□□ 0.04
MBD1-220ENST00000589758 NFATC1O95644 943 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 EGFP01133 1207 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 NR3C1P04150 777 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 RETP07949 1114 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 SLC7A9P82251 487 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 LMNB2Q03252 620 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 SGSM1Q2NKQ1 1148 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 HEATR6Q6AI08 1181 aaKnown RBP15.27■□□□□ 0.04
MBD1-220ENST00000589758 DGLUCYQ7Z3D6 616 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 CCDC26Q8TAB7 109 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 OVCA2Q8WZ82 227 aa15.27■□□□□ 0.04
MBD1-220ENST00000589758 TAF4BQ92750 862 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms