RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 CHD9Q3L8U1 2897 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 CHD7Q9P2D1 2997 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 WDR81Q562E7 1941 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 COL4A6Q14031 1691 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 C2orf71A6NGG8 1288 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 NRP1O14786 923 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 CLASP2O75122 1294 aaKnown RBP9.02□□□□□ -0.97
DNMT1-219ENST00000589349 DDHD2O94830 711 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 WEE2P0C1S8 567 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 PDCP20941 246 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 UBA7P41226 1012 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 NAMPTP43490 491 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 OSTNP61366 133 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 CEBPZQ03701 1054 aaKnown RBP9.02□□□□□ -0.97
DNMT1-219ENST00000589349 STRN3Q13033 797 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 GIT2Q14161 759 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 SMAD2Q15796 467 aaKnown RBP9.02□□□□□ -0.97
DNMT1-219ENST00000589349 GAB4Q2WGN9 574 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 RARS2Q5T160 578 aaKnown RBP9.02□□□□□ -0.97
DNMT1-219ENST00000589349 MRPL10Q7Z7H8 261 aaKnown RBP9.02□□□□□ -0.97
DNMT1-219ENST00000589349 DDX53Q86TM3 631 aaKnown RBP9.02□□□□□ -0.97
DNMT1-219ENST00000589349 TMEM173Q86WV6 379 aaPredicted RBP9.02□□□□□ -0.97
DNMT1-219ENST00000589349 CEP57Q86XR8 500 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 CREG2Q8IUH2 290 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 C12orf76Q8N812 135 aaPredicted RBP9.02□□□□□ -0.97
DNMT1-219ENST00000589349 HASPINQ8TF76 798 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 CPLX3Q8WVH0 158 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 RSPH1Q8WYR4 309 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 CALML4Q96GE6 196 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 TMEM175Q9BSA9 504 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 MKRN2Q9H000 416 aaKnown RBP9.02□□□□□ -0.97
DNMT1-219ENST00000589349 KMT5AQ9NQR1 393 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 SNTG2Q9NY99 539 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 CLEC1BQ9P126 229 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 PRKAG3Q9UGI9 489 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 GIT1Q9Y2X7 761 aa9.02□□□□□ -0.97
DNMT1-219ENST00000589349 CASTOR2A6NHX0 329 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 DCXO43602 365 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 HIP1RO75146 1068 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 EYA4O95677 639 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 GLP2RO95838 553 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 JUNBP17275 347 aaPredicted RBP9.01□□□□□ -0.97
DNMT1-219ENST00000589349 EFNA5P52803 228 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 POU5F1BQ06416 359 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 COASYQ13057 564 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 CBX2Q14781 532 aaPredicted RBP9.01□□□□□ -0.97
DNMT1-219ENST00000589349 ATAT1Q5SQI0 421 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 ATF7IP2Q5U623 682 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 ANKRD54Q6NXT1 300 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 C4orf32Q8N8J7 132 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 LRRN4CLQ8ND94 238 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 VN1R2Q8NFZ6 395 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 BICD1Q96G01 975 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 DRC1Q96MC2 740 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 PRDM7Q9NQW5 492 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 SUCOQ9UBS9 1254 aaKnown RBP9.01□□□□□ -0.97
DNMT1-219ENST00000589349 RAPGEFL1Q9UHV5 662 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 MUTYHQ9UIF7 546 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 SSX2IPQ9Y2D8 614 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 HCFC2Q9Y5Z7 792 aa9.01□□□□□ -0.97
DNMT1-219ENST00000589349 FNDC1Q4ZHG4 1894 aaPredicted RBP9□□□□□ -0.97
DNMT1-219ENST00000589349 VCANP13611 3396 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 A0A1B0GUA9 196 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 ACKR2O00590 384 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 SLC16A4O15374 487 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 ESR1P03372 595 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 THP07101 528 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 SPATA31D3P0C874 917 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 CTSAP10619 480 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 EPCAMP16422 314 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 MUTP22033 750 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 PRPHP41219 470 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 GIPRP48546 466 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 IL17AQ16552 155 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 ZNF568Q3ZCX4 644 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 TMC5Q6UXY8 1006 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 SPATA31D4Q6ZUB0 917 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 ATG4DQ86TL0 474 aaPredicted RBP9□□□□□ -0.97
DNMT1-219ENST00000589349 PPFIBP1Q86W92 1011 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 PALB2Q86YC2 1186 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 IGSF22Q8N9C0 903 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 SMRP1Q8NCR6 262 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 MSLNLQ96KJ4 702 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 B3GALT6Q96L58 329 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 RIPOR3Q96MK2 946 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 ALPK1Q96QP1 1244 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 CCDC94Q9BW85 323 aaPredicted RBP9□□□□□ -0.97
DNMT1-219ENST00000589349 PHF7Q9BWX1 381 aaPredicted RBP9□□□□□ -0.97
DNMT1-219ENST00000589349 NFKBIZQ9BYH8 718 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 NT5C3AQ9H0P0 336 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 ZBP1Q9H171 429 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 PDZD7Q9H5P4 517 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 MIOSQ9NXC5 875 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 ANKFY1Q9P2R3 1169 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 CACNG4Q9UBN1 327 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 STK39Q9UEW8 545 aa9□□□□□ -0.97
DNMT1-219ENST00000589349 KIAA1671Q9BY89 1806 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 NPHP3-ACAD11A0A0J9YXS1 232 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 PI4K2BG5E9Z4 385 aa8.99□□□□□ -0.97
DNMT1-219ENST00000589349 B4GALT3O60512 393 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms