RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 BPIFB1Q8TDL5 484 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 FAM3CQ92520 227 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 USP13Q92995 863 aaPredicted RBP12.31□□□□□ -0.44
RFX1-204ENST00000588885 FUBP3Q96I24 572 aaKnown RBP eCLIP12.31□□□□□ -0.44
RFX1-204ENST00000588885 GSDMAQ96QA5 445 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 TMEM121BQ9BXQ6 578 aaPredicted RBP12.31□□□□□ -0.44
RFX1-204ENST00000588885 B3GNT5Q9BYG0 378 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 ZNF518BQ9C0D4 1074 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 SDCBP2Q9H190 292 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 ANO10Q9NW15 660 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 RMND1Q9NWS8 449 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 GTSE1Q9NYZ3 720 aa12.31□□□□□ -0.44
RFX1-204ENST00000588885 MRPS17Q9Y2R5 130 aaKnown RBP12.31□□□□□ -0.44
RFX1-204ENST00000588885 PROB1E7EW31 1015 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 F8VP50 259 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 ARNTLO00327 626 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 MAN2B1O00754 1011 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 TADA3O75528 432 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 ABL1P00519 1130 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 HLA-DRAP01903 254 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 KRT13P13646 458 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 RPL13P26373 211 aaKnown RBP12.3□□□□□ -0.44
RFX1-204ENST00000588885 PIK3CAP42336 1068 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 FCHO2Q0JRZ9 810 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 IFRD2Q12894 506 aaPredicted RBP12.3□□□□□ -0.44
RFX1-204ENST00000588885 FZD5Q13467 585 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 SGSM1Q2NKQ1 1148 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 ZACNQ401N2 412 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 ADSSL1Q8N142 457 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 CELF5Q8N6W0 485 aaKnown RBP12.3□□□□□ -0.44
RFX1-204ENST00000588885 B3GALNT2Q8NCR0 500 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 RNF214Q8ND24 703 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 TMEM174Q8WUU8 243 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 SLC22A12Q96S37 553 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 NELL2Q99435 816 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 MED10Q9BTT4 135 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 RBSNQ9H1K0 784 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 LMAN1LQ9HAT1 526 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 GKN1Q9NS71 199 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 THG1LQ9NWX6 298 aaKnown RBP12.3□□□□□ -0.44
RFX1-204ENST00000588885 UXTQ9UBK9 157 aaPredicted RBP12.3□□□□□ -0.44
RFX1-204ENST00000588885 R4GN57 208 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 TSC2P49815 1807 aa12.3□□□□□ -0.44
RFX1-204ENST00000588885 RALGAPA1Q6GYQ0 2036 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 C2orf78A6NCI8 922 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 NCAM2O15394 837 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 STAU1O95793 577 aaKnown RBP12.29□□□□□ -0.44
RFX1-204ENST00000588885 FAM163BP0C2L3 166 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 SP9P0CG40 484 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 DDX6P26196 483 aaKnown RBP eCLIP12.29□□□□□ -0.44
RFX1-204ENST00000588885 PSMC2P35998 433 aaKnown RBP12.29□□□□□ -0.44
RFX1-204ENST00000588885 PRCPP42785 496 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 CSTF1Q05048 431 aaKnown RBP12.29□□□□□ -0.44
RFX1-204ENST00000588885 PPP3CAQ08209 521 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 MTAPQ13126 283 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 ARHGAP29Q52LW3 1261 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 ZNF658Q5TYW1 1059 aaPredicted RBP12.29□□□□□ -0.44
RFX1-204ENST00000588885 TRIM68Q6AZZ1 485 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 TSSK4Q6SA08 328 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 VSTM1Q6UX27 236 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 DENND5BQ6ZUT9 1274 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 ACOT1Q86TX2 421 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 MAML2Q8IZL2 1156 aaPredicted RBP12.29□□□□□ -0.44
RFX1-204ENST00000588885 ARL14EPQ8N8R7 260 aaPredicted RBP12.29□□□□□ -0.44
RFX1-204ENST00000588885 TRMT2BQ96GJ1 504 aaKnown RBP12.29□□□□□ -0.44
RFX1-204ENST00000588885 SPATA17Q96L03 361 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 MYRFLQ96LU7 910 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 OSBPL6Q9BZF3 934 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 TRPV5Q9NQA5 729 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 RBM12Q9NTZ6 932 aaKnown RBP12.29□□□□□ -0.44
RFX1-204ENST00000588885 TDP1Q9NUW8 608 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 TMEM30AQ9NV96 361 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 HMGXB4Q9UGU5 601 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 CTNND2Q9UQB3 1225 aa12.29□□□□□ -0.44
RFX1-204ENST00000588885 KIF26AQ9ULI4 1882 aaPredicted RBP12.28□□□□□ -0.44
RFX1-204ENST00000588885 TRAV19A0A0A6YYK7 116 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 SPECC1L-ADORA2AF8WAN1 911 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 IKBKBO14920 756 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 TRIM66O15016 1216 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 LAMTOR5O43504 91 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 CKMP06732 381 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 P4HA1P13674 534 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 ARSAP15289 507 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 WEE1P30291 646 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 NDST1P52848 882 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 ZCWPW2Q504Y3 356 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 CC2D1AQ6P1N0 951 aaPredicted RBP12.28□□□□□ -0.44
RFX1-204ENST00000588885 TXNDC11Q6PKC3 985 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 INTS8Q75QN2 995 aaKnown RBP12.28□□□□□ -0.44
RFX1-204ENST00000588885 ZNF687Q8N1G0 1237 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 RIN3Q8TB24 985 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 TAS1R2Q8TE23 839 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 CLDN23Q96B33 292 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 KCNK16Q96T55 309 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 EBF3Q9H4W6 596 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 VRTNQ9H8Y1 702 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 APOBEC3GQ9HC16 384 aaKnown RBP12.28□□□□□ -0.44
RFX1-204ENST00000588885 CBX8Q9HC52 389 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 OBP2AQ9NY56 170 aa12.28□□□□□ -0.44
RFX1-204ENST00000588885 OTOL1A6NHN0 477 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms