RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 STRIP2Q9ULQ0 834 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 GOLGA8SH3BPF8 625 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 KIF5CO60282 957 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 ZNF500O60304 480 aaPredicted RBP15.29■□□□□ 0.04
NPC1-207ENST00000588867 CYP1A2P05177 515 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 CTSAP10619 480 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 SNX16P57768 344 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 ROR1Q01973 937 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 OR6B2Q6IFH4 312 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 SCUBE3Q8IX30 993 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 ZMIZ2Q8NF64 920 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 POF1BQ8WVV4 589 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 TGS1Q96RS0 853 aaKnown RBP15.29■□□□□ 0.04
NPC1-207ENST00000588867 MIS12Q9H081 205 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 CERS4Q9HA82 394 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 LRRC4Q9HBW1 653 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 DMAP1Q9NPF5 467 aaPredicted RBP15.29■□□□□ 0.04
NPC1-207ENST00000588867 SSX2IPQ9Y2D8 614 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 SLC27A5Q9Y2P5 690 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 LAMA2P24043 3122 aaKnown RBP15.29■□□□□ 0.04
NPC1-207ENST00000588867 WDR27A2RRH5 827 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 MTMR11A4FU01 709 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 BTNL10A8MVZ5 291 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 F8VP50 259 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 BMP8BP34820 402 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 GNG11P61952 73 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 TAP1Q03518 808 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 ADCY1Q08828 1119 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 CFAP221Q4G0U5 840 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 ZNF569Q5MCW4 686 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 TMEM110Q86TL2 294 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 RHOT2Q8IXI1 618 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 RNF10Q8N5U6 811 aaKnown RBP15.29■□□□□ 0.04
NPC1-207ENST00000588867 SPPL3Q8TCT6 385 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 MICAL1Q8TDZ2 1067 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 FUBP3Q96I24 572 aaKnown RBP eCLIP15.29■□□□□ 0.04
NPC1-207ENST00000588867 HSFY1Q96LI6 401 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 TCF25Q9BQ70 676 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 C11orf84Q9BUA3 381 aaPredicted RBP15.29■□□□□ 0.04
NPC1-207ENST00000588867 NKX2-4Q9H2Z4 354 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 ENTPD7Q9NQZ7 604 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 PARVAQ9NVD7 372 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 NCANO14594 1321 aa15.29■□□□□ 0.04
NPC1-207ENST00000588867 A0A0A6YYK5 440 aaPredicted RBP15.28■□□□□ 0.04
NPC1-207ENST00000588867 C5orf67F2Z3F1 127 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 GABBR2O75899 941 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 GJB6O95452 261 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 RB1P06400 928 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 ACADSBP45954 432 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 GABRB2P47870 512 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 RGS19P49795 217 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 ERVFC1P60507 584 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 SMARCB1Q12824 385 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 DUSP4Q13115 394 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 MAMLD1Q13495 774 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 ZNF268Q14587 947 aaPredicted RBP15.28■□□□□ 0.04
NPC1-207ENST00000588867 MGAT5BQ3V5L5 792 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 DNAJC24Q6P3W2 148 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 XYLT1Q86Y38 959 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 TDHQ8IZJ6 230 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 TTC9BQ8N6N2 239 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 SPPL2BQ8TCT7 592 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 CSNK1G1Q9HCP0 422 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 MRPL47Q9HD33 250 aaKnown RBP15.28■□□□□ 0.04
NPC1-207ENST00000588867 AVENQ9NQS1 362 aaPredicted RBP15.28■□□□□ 0.04
NPC1-207ENST00000588867 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.28■□□□□ 0.04
NPC1-207ENST00000588867 WDR35Q9P2L0 1181 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 COG5Q9UP83 839 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 LZTS1Q9Y250 596 aa15.28■□□□□ 0.04
NPC1-207ENST00000588867 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.27■□□□□ 0.04
NPC1-207ENST00000588867 DNAJB1P25685 340 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 TKTL1P51854 596 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 ADIGQ0VDE8 80 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 RAB30Q15771 203 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 DDR2Q16832 855 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 PLEKHA7Q6IQ23 1121 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 NYAP1Q6ZVC0 841 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 FAM183BPQ6ZVS7 135 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 ZNF461Q8TAF7 563 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 ZNF564Q8TBZ8 553 aaPredicted RBP15.27■□□□□ 0.04
NPC1-207ENST00000588867 KCTD13Q8WZ19 329 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 SAMD11Q96NU1 681 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 SEPT5Q99719 369 aaPredicted RBP15.27■□□□□ 0.04
NPC1-207ENST00000588867 SELENOOQ9BVL4 669 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 UVRAGQ9P2Y5 699 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 CAPN6Q9Y6Q1 641 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 SCINQ9Y6U3 715 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 PTPRDP23468 1912 aa15.27■□□□□ 0.04
NPC1-207ENST00000588867 GRM6O15303 877 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 TEX28O15482 410 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 LILRB3O75022 631 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 SOAT2O75908 522 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 NDUFV1P49821 464 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 RNASE9P60153 205 aaKnown RBP15.27■□□□□ 0.03
NPC1-207ENST00000588867 ERVK-21P61565 698 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 CREMQ03060 361 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 IFI16Q16666 785 aaKnown RBP15.27■□□□□ 0.03
NPC1-207ENST00000588867 FAM102AQ5T9C2 384 aaPredicted RBP15.27■□□□□ 0.03
NPC1-207ENST00000588867 SDHAF4Q5VUM1 108 aa15.27■□□□□ 0.03
NPC1-207ENST00000588867 PLPP4Q5VZY2 271 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms