RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 E5RJQ4 531 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 H3BQF6 201 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 CYB561D2O14569 222 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 MGEA5O60502 916 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 THP07101 528 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 FAM153BP0C7A2 387 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 RALAP11233 206 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 CCDC130P13994 396 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 GPD1P21695 349 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 WARSP23381 471 aaKnown RBP9.22□□□□□ -0.93
SMAD4-206ENST00000588860 ADORA2BP29275 332 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 FNTAP49354 379 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 RAB27AP51159 221 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 LILRA4P59901 499 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 FAM193AP78312 1265 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 SNX1Q13596 522 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 DSC3Q14574 896 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 ARHGEF6Q15052 776 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 FAM153CQ494X1 144 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 FAM26DQ5JW98 314 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 ZNF618Q5T7W0 954 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 LRRC38Q5VT99 294 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 LIMS2Q7Z4I7 341 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 MRPL10Q7Z7H8 261 aaKnown RBP9.22□□□□□ -0.93
SMAD4-206ENST00000588860 OSTM1Q86WC4 334 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 TTC30AQ86WT1 665 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 CCDC105Q8IYK2 499 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 RCOR2Q8IZ40 523 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 EMC1Q8N766 993 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 EIF1ADQ8N9N8 165 aaKnown RBP9.22□□□□□ -0.93
SMAD4-206ENST00000588860 TSEN2Q8NCE0 465 aaKnown RBP9.22□□□□□ -0.93
SMAD4-206ENST00000588860 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.22□□□□□ -0.93
SMAD4-206ENST00000588860 ACSF2Q96CM8 615 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-206ENST00000588860 MCRS1Q96EZ8 462 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 GLT1D1Q96MS3 346 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 SLITRK1Q96PX8 696 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 HERPUD2Q9BSE4 406 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 TSEN34Q9BSV6 310 aaKnown RBP9.22□□□□□ -0.93
SMAD4-206ENST00000588860 HEMGNQ9BXL5 484 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 OSBPL8Q9BZF1 889 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 UBXN6Q9BZV1 441 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 DCLK3Q9C098 648 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 ZWILCHQ9H900 591 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 HMX1Q9NP08 348 aaPredicted RBP9.22□□□□□ -0.93
SMAD4-206ENST00000588860 FAM153AQ9UHL3 310 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 PTPN22Q9Y2R2 807 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 GIT1Q9Y2X7 761 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 A0A1W2PQ45 241 aaPredicted RBP9.21□□□□□ -0.94
SMAD4-206ENST00000588860 A0A1W2PQY0 241 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 LRRD1A4D1F6 860 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 GOLGA6BA6NDN3 693 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 TULP2O00295 520 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 SOX1O00570 391 aaPredicted RBP9.21□□□□□ -0.94
SMAD4-206ENST00000588860 PODXLO00592 558 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 POLR3GO15318 223 aaPredicted RBP9.21□□□□□ -0.94
SMAD4-206ENST00000588860 HSF2BPO75031 334 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 CAND2O75155 1236 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 ECEL1O95672 775 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 KRT7P08729 469 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 LMO2P25791 158 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 ECHS1P30084 290 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 KCNJ1P48048 391 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 AARSP49588 968 aaKnown RBP eCLIP9.21□□□□□ -0.94
SMAD4-206ENST00000588860 SCNN1GP51170 649 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 BCAT1P54687 386 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 SNX16P57768 344 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 PDE4CQ08493 712 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 BST2Q10589 180 aaKnown RBP9.21□□□□□ -0.94
SMAD4-206ENST00000588860 HADHQ16836 314 aaKnown RBP9.21□□□□□ -0.94
SMAD4-206ENST00000588860 ATP13A4Q4VNC1 1196 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 PKDCCQ504Y2 493 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 HSP90B2PQ58FF3 399 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 KAZNQ674X7 775 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 DUPD1Q68J44 220 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 TXNRD3NBQ6F5E7 133 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 PMF1Q6P1K2 205 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 DSTYKQ6XUX3 929 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 SPOCD1Q6ZMY3 1216 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 AGMOQ6ZNB7 445 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 CRYBG2Q8N1P7 616 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 FNIP1Q8TF40 1166 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 ATG4AQ8WYN0 398 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 SEC14L1Q92503 715 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 DPF3Q92784 378 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 PGBD4Q96DM1 585 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 LRCH3Q96II8 777 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 TNIP3Q96KP6 325 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 ADAM2Q99965 735 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 ERP44Q9BS26 406 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 SLC4A5Q9BY07 1137 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 TRPV6Q9H1D0 765 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 NEUROG2Q9H2A3 272 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 PRO3102Q9H379 93 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 LRRC19Q9H756 370 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 RSAD1Q9HA92 442 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 CHST7Q9NS84 486 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 MIOSQ9NXC5 875 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 R3HDM2Q9Y2K5 976 aaKnown RBP9.21□□□□□ -0.94
SMAD4-206ENST00000588860 SNX24Q9Y343 169 aa9.21□□□□□ -0.94
SMAD4-206ENST00000588860 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms