RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 ASB3Q9Y575 518 aa20.08■□□□□ 0.81
CLPTM1-209ENST00000588855 M0QYV0 167 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 CFHP08603 1231 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 BCAT1P54687 386 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 STILQ15468 1287 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 ATAT1Q5SQI0 421 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 ITIH5Q86UX2 942 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 UBA3Q8TBC4 463 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 RIPOR3Q96MK2 946 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 ZNF334Q9HCZ1 680 aaPredicted RBP20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 LRRC53A6NM62 1247 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 MED7O43513 233 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 GYPCP04921 128 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 RHOP08100 348 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 CSH1P0DML2 217 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 CSH2P0DML3 217 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 CYP11B1P15538 503 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 HMGA1P17096 107 aaKnown RBP20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 PTPN2P17706 415 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 MTHFRP42898 656 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 BPIFB4P59827 614 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 PDE4CQ08493 712 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 BST2Q10589 180 aaKnown RBP20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 CBX2Q14781 532 aaPredicted RBP20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 PABPC1LQ4VXU2 614 aaKnown RBP20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 PKDCCQ504Y2 493 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 SPECC1LQ69YQ0 1117 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 PTCRAQ6ISU1 281 aaPredicted RBP20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 DENND5BQ6ZUT9 1274 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 TMC8Q8IU68 726 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 EPS8L1Q8TE68 723 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 LRRC3Q9BY71 257 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 EDEM3Q9BZQ6 932 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 POMKQ9H5K3 350 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 ASAH2Q9NR71 780 aa20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 MAGED2Q9UNF1 606 aaPredicted RBP20.07■□□□□ 0.8
CLPTM1-209ENST00000588855 DENND4CQ5VZ89 1909 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 A0A1W2PQJ5 194 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 HHLA1C9JL84 531 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 TULP2O00295 520 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 TNFRSF10BO14763 440 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 PDE6CP51160 858 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 KCNQ1P51787 676 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 ZNF75DP51815 510 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 USP46P62068 366 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 ARID5AQ03989 594 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 TAF12Q16514 161 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 DENND1BQ6P3S1 775 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 GPRIN1Q7Z2K8 1008 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 NOP9Q86U38 636 aaKnown RBP20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 CPLX3Q8WVH0 158 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 CEP295NLQ96MC4 621 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 WDR6Q9NNW5 1121 aaKnown RBP20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 MYO6Q9UM54 1294 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 CLUHO75153 1309 aa20.06■□□□□ 0.8
CLPTM1-209ENST00000588855 NRG2O14511 850 aaPredicted RBP20.05■□□□□ 0.8
CLPTM1-209ENST00000588855 MYL4P12829 197 aa20.05■□□□□ 0.8
CLPTM1-209ENST00000588855 CCR2P41597 374 aa20.05■□□□□ 0.8
CLPTM1-209ENST00000588855 SLC5A3P53794 718 aa20.05■□□□□ 0.8
CLPTM1-209ENST00000588855 EPHA5P54756 1037 aa20.05■□□□□ 0.8
CLPTM1-209ENST00000588855 IFRD2Q12894 506 aaPredicted RBP20.05■□□□□ 0.8
CLPTM1-209ENST00000588855 SLC5A9Q2M3M2 681 aa20.05■□□□□ 0.8
CLPTM1-209ENST00000588855 TAF3Q5VWG9 929 aa20.05■□□□□ 0.8
CLPTM1-209ENST00000588855 E4F1Q66K89 784 aaPredicted RBP20.05■□□□□ 0.8
CLPTM1-209ENST00000588855 NUP93Q8N1F7 819 aa20.05■□□□□ 0.8
CLPTM1-209ENST00000588855 DDX1Q92499 740 aaKnown RBP20.05■□□□□ 0.8
CLPTM1-209ENST00000588855 SECISBP2LQ93073 1101 aaKnown RBP20.05■□□□□ 0.8
CLPTM1-209ENST00000588855 NECTIN4Q96NY8 510 aa20.05■□□□□ 0.8
CLPTM1-209ENST00000588855 NOCTQ9UK39 431 aaKnown RBP20.05■□□□□ 0.8
CLPTM1-209ENST00000588855 CAPN11Q9UMQ6 739 aa20.05■□□□□ 0.8
CLPTM1-209ENST00000588855 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.05■□□□□ 0.86e-9■■■■■ 35.4
CLPTM1-209ENST00000588855 XPO1O14980 1071 aaKnown RBP20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 SETSIPP0DME0 302 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 IL9P15248 144 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 SLC8A3P57103 927 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 SMAD2Q15796 467 aaKnown RBP20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 PRSS36Q5K4E3 855 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 PDZD4Q76G19 769 aaPredicted RBP20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 PIGZQ86VD9 579 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 PASD1Q8IV76 773 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 DOCK8Q8NF50 2099 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 SCAMP5Q8TAC9 235 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 SLC20A1Q8WUM9 679 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 IQCDQ96DY2 449 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 TCEAL4Q96EI5 215 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 TRMT2BQ96GJ1 504 aaKnown RBP20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 MRFAP1L1Q96HT8 127 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 IL21Q9HBE4 155 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 PNPLA8Q9NP80 782 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 PCDHGC3Q9UN70 934 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 ANAPC1Q9H1A4 1944 aa20.04■□□□□ 0.8
CLPTM1-209ENST00000588855 FERP16591 822 aa20.03■□□□□ 0.8
CLPTM1-209ENST00000588855 CASP14P31944 242 aa20.03■□□□□ 0.8
CLPTM1-209ENST00000588855 GPD2P43304 727 aa20.03■□□□□ 0.8
CLPTM1-209ENST00000588855 MEA1Q16626 185 aa20.03■□□□□ 0.8
CLPTM1-209ENST00000588855 AAK1Q2M2I8 961 aa20.03■□□□□ 0.8
CLPTM1-209ENST00000588855 CYP4A22Q5TCH4 519 aa20.03■□□□□ 0.8
CLPTM1-209ENST00000588855 TMC6Q7Z403 805 aa20.03■□□□□ 0.8
CLPTM1-209ENST00000588855 ITFG1Q8TB96 612 aa20.03■□□□□ 0.8
CLPTM1-209ENST00000588855 MYRFLQ96LU7 910 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms