RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 ALG6Q9Y672 507 aa32.69■■■□□ 2.82
CAPNS1-206ENST00000588815 SAR1BQ9Y6B6 198 aa32.69■■■□□ 2.82
CAPNS1-206ENST00000588815 ENC1O14682 589 aa32.68■■■□□ 2.82
CAPNS1-206ENST00000588815 FTCDO95954 541 aa32.68■■■□□ 2.82
CAPNS1-206ENST00000588815 TCP1P17987 556 aaKnown RBP32.68■■■□□ 2.82
CAPNS1-206ENST00000588815 RGS7P49802 495 aa32.68■■■□□ 2.82
CAPNS1-206ENST00000588815 AMPD2Q01433 879 aa32.68■■■□□ 2.82
CAPNS1-206ENST00000588815 MESDQ14696 234 aa32.68■■■□□ 2.82
CAPNS1-206ENST00000588815 GPR65Q8IYL9 337 aa32.68■■■□□ 2.82
CAPNS1-206ENST00000588815 SP7Q8TDD2 431 aaPredicted RBP32.68■■■□□ 2.82
CAPNS1-206ENST00000588815 PIK3R5Q8WYR1 880 aa32.68■■■□□ 2.82
CAPNS1-206ENST00000588815 TMEM209Q96SK2 561 aa32.68■■■□□ 2.82
CAPNS1-206ENST00000588815 L2HGDHQ9H9P8 463 aa32.68■■■□□ 2.82
CAPNS1-206ENST00000588815 TJP2Q9UDY2 1190 aa32.68■■■□□ 2.82
CAPNS1-206ENST00000588815 BACE2Q9Y5Z0 518 aa32.68■■■□□ 2.82
CAPNS1-206ENST00000588815 ATP2A2P16615 1042 aaKnown RBP32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 MAN1A1P33908 653 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 RTP2Q5QGT7 225 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 COL13A1Q5TAT6 717 aaPredicted RBP32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 RASIP1Q5U651 963 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 OR6B2Q6IFH4 312 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 LLGL2Q6P1M3 1020 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 CLP1Q92989 425 aaKnown RBP32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 HERC2P3Q9BVR0 1158 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 DMAP1Q9NPF5 467 aaPredicted RBP32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 TMLHEQ9NVH6 421 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 SNX12Q9UMY4 172 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 HYOU1Q9Y4L1 999 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 MIF4GDA9UHW6 222 aaKnown RBP32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 SLC6A3Q01959 620 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 RPS6KA1Q15418 735 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 SLC39A12Q504Y0 691 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 FAM183BPQ6ZVS7 135 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 ARCQ7LC44 396 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 PHLDB2Q86SQ0 1253 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 DDX53Q86TM3 631 aaKnown RBP32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 GADD45GIP1Q8TAE8 222 aaPredicted RBP32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 C2orf15Q8WU43 125 aaKnown RBP32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 MCEEQ96PE7 176 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 SMOQ99835 787 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 LRRC4Q9HBW1 653 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 MTRRQ9UBK8 725 aa32.67■■■□□ 2.82
CAPNS1-206ENST00000588815 GOLGA8SH3BPF8 625 aa32.66■■■□□ 2.82
CAPNS1-206ENST00000588815 PROSCO94903 275 aa32.66■■■□□ 2.82
CAPNS1-206ENST00000588815 MAP3K7CLP57077 242 aa32.66■■■□□ 2.82
CAPNS1-206ENST00000588815 PIGHQ14442 188 aaPredicted RBP32.66■■■□□ 2.82
CAPNS1-206ENST00000588815 FAM102AQ5T9C2 384 aaPredicted RBP32.66■■■□□ 2.82
CAPNS1-206ENST00000588815 OLFML1Q6UWY5 402 aa32.66■■■□□ 2.82
CAPNS1-206ENST00000588815 VSTM1Q6UX27 236 aa32.66■■■□□ 2.82
CAPNS1-206ENST00000588815 HES6Q96HZ4 224 aa32.66■■■□□ 2.82
CAPNS1-206ENST00000588815 PCDH10Q9P2E7 1040 aa32.66■■■□□ 2.82
CAPNS1-206ENST00000588815 CDC23Q9UJX2 597 aa32.66■■■□□ 2.82
CAPNS1-206ENST00000588815 PLXNA4Q9HCM2 1894 aa32.65■■■□□ 2.82
CAPNS1-206ENST00000588815 CCDC85CA6NKD9 419 aa32.65■■■□□ 2.82
CAPNS1-206ENST00000588815 PAPSS1O43252 624 aaPredicted RBP32.65■■■□□ 2.82
CAPNS1-206ENST00000588815 BEST1O76090 585 aa32.65■■■□□ 2.82
CAPNS1-206ENST00000588815 FBXO21O94952 628 aa32.65■■■□□ 2.82
CAPNS1-206ENST00000588815 BDNFP23560 247 aa32.65■■■□□ 2.82
CAPNS1-206ENST00000588815 RPL7AP62424 266 aaKnown RBP32.65■■■□□ 2.82
CAPNS1-206ENST00000588815 GPR17Q13304 367 aa32.65■■■□□ 2.82
CAPNS1-206ENST00000588815 KIAA1841Q6NSI8 718 aa32.65■■■□□ 2.82
CAPNS1-206ENST00000588815 NIPA2Q8N8Q9 360 aa32.65■■■□□ 2.82
CAPNS1-206ENST00000588815 PCDHB5Q9Y5E4 795 aa32.65■■■□□ 2.82
CAPNS1-206ENST00000588815 GBF1Q92538 1859 aa32.65■■■□□ 2.82
CAPNS1-206ENST00000588815 MAGEA11P43364 429 aa32.64■■■□□ 2.82
CAPNS1-206ENST00000588815 DSG1Q02413 1049 aa32.64■■■□□ 2.82
CAPNS1-206ENST00000588815 ACAP1Q15027 740 aa32.64■■■□□ 2.82
CAPNS1-206ENST00000588815 RAB41Q5JT25 222 aa32.64■■■□□ 2.82
CAPNS1-206ENST00000588815 SLC26A9Q7LBE3 791 aa32.64■■■□□ 2.82
CAPNS1-206ENST00000588815 TAS1R1Q7RTX1 841 aa32.64■■■□□ 2.82
CAPNS1-206ENST00000588815 ZMIZ2Q8NF64 920 aa32.64■■■□□ 2.82
CAPNS1-206ENST00000588815 SPPL2BQ8TCT7 592 aa32.64■■■□□ 2.82
CAPNS1-206ENST00000588815 VN1R3Q9BXE9 311 aa32.64■■■□□ 2.82
CAPNS1-206ENST00000588815 GOLPH3Q9H4A6 298 aa32.64■■■□□ 2.82
CAPNS1-206ENST00000588815 METTL5Q9NRN9 209 aaKnown RBP32.64■■■□□ 2.82
CAPNS1-206ENST00000588815 RWDD3Q9Y3V2 267 aa32.64■■■□□ 2.82
CAPNS1-206ENST00000588815 MRFAP1Q9Y605 127 aa32.64■■■□□ 2.82
CAPNS1-206ENST00000588815 GREB1Q4ZG55 1949 aa32.64■■■□□ 2.82
CAPNS1-206ENST00000588815 CES2O00748 559 aa32.63■■■□□ 2.81
CAPNS1-206ENST00000588815 TLL1O43897 1013 aa32.63■■■□□ 2.81
CAPNS1-206ENST00000588815 GABBR2O75899 941 aa32.63■■■□□ 2.81
CAPNS1-206ENST00000588815 COMTP21964 271 aa32.63■■■□□ 2.81
CAPNS1-206ENST00000588815 GLUD2P49448 558 aa32.63■■■□□ 2.81
CAPNS1-206ENST00000588815 KRT17Q04695 432 aa32.63■■■□□ 2.81
CAPNS1-206ENST00000588815 PSMD5Q16401 504 aa32.63■■■□□ 2.81
CAPNS1-206ENST00000588815 EFHC1Q5JVL4 640 aa32.63■■■□□ 2.81
CAPNS1-206ENST00000588815 SLC8B1Q6J4K2 584 aa32.63■■■□□ 2.81
CAPNS1-206ENST00000588815 BTBD6Q96KE9 485 aa32.63■■■□□ 2.81
CAPNS1-206ENST00000588815 B3GALT6Q96L58 329 aa32.63■■■□□ 2.81
CAPNS1-206ENST00000588815 CNGB3Q9NQW8 809 aa32.63■■■□□ 2.81
CAPNS1-206ENST00000588815 ZNF638Q14966 1978 aaKnown RBP32.63■■■□□ 2.81
CAPNS1-206ENST00000588815 SART1O43290 800 aaKnown RBP32.62■■■□□ 2.81
CAPNS1-206ENST00000588815 SPOPO43791 374 aa32.62■■■□□ 2.81
CAPNS1-206ENST00000588815 CPB1P15086 417 aa32.62■■■□□ 2.81
CAPNS1-206ENST00000588815 SCUBE3Q8IX30 993 aa32.62■■■□□ 2.81
CAPNS1-206ENST00000588815 SIX6OS1Q8N1H7 587 aa32.62■■■□□ 2.81
CAPNS1-206ENST00000588815 SCML4Q8N228 414 aa32.62■■■□□ 2.81
CAPNS1-206ENST00000588815 RIN2Q8WYP3 895 aaPredicted RBP32.62■■■□□ 2.81
CAPNS1-206ENST00000588815 OSBPL9Q96SU4 736 aa32.62■■■□□ 2.81
CAPNS1-206ENST00000588815 ASNSD1Q9NWL6 643 aa32.62■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms