RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 WHAMMQ8TF30 809 aa16.38■□□□□ 0.21
IFT20-216ENST00000588477 POLMQ9NP87 494 aaPredicted RBP16.38■□□□□ 0.21
IFT20-216ENST00000588477 FSCN3Q9NQT6 498 aa16.38■□□□□ 0.21
IFT20-216ENST00000588477 BCCIPQ9P287 314 aaKnown RBP eCLIP16.38■□□□□ 0.21
IFT20-216ENST00000588477 MBD1Q9UIS9 605 aaPredicted RBP16.38■□□□□ 0.21
IFT20-216ENST00000588477 MYH10P35580 1976 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 SGK1O00141 431 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 LEFTY2O00292 366 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 SEC24BO95487 1268 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 CYP17A1P05093 508 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 ADSSP30520 456 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 UBA7P41226 1012 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 SEMA3BQ13214 749 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 EMC10Q5UCC4 262 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 FILIP1Q7Z7B0 1213 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 PIP4P1Q86T03 277 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 ADGRG2Q8IZP9 1017 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 PGBD3Q8N328 593 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 CSGALNACT2Q8N6G5 542 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 C1orf127Q8N9H9 656 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 RAD54LQ92698 747 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 AK8Q96MA6 479 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 PNKPQ96T60 521 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 ZDHHC4Q9NPG8 344 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 SNX9Q9Y5X1 595 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 PTPRBP23467 1997 aa16.37■□□□□ 0.21
IFT20-216ENST00000588477 TAF4O00268 1085 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 SLC26A4O43511 780 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 ATP2C2O75185 946 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 CFIP05156 583 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 KRT19P08727 400 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 PLCG1P19174 1290 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 ITPKAP23677 461 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 RDXP35241 583 aaKnown RBP16.36■□□□□ 0.21
IFT20-216ENST00000588477 LHX1P48742 406 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 PDE6CP51160 858 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 ATXN3P54252 364 aaPredicted RBP16.36■□□□□ 0.21
IFT20-216ENST00000588477 MESP2Q0VG99 397 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 POSTNQ15063 836 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 DHCR24Q15392 516 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 LYSMD4Q5XG99 296 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 LMBRD2Q68DH5 695 aaPredicted RBP16.36■□□□□ 0.21
IFT20-216ENST00000588477 HDDC3Q8N4P3 179 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 CHCHD4Q8N4Q1 142 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 ZSWIM2Q8NEG5 633 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 SPATA18Q8TC71 538 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 CACTINQ8WUQ7 758 aaKnown RBP16.36■□□□□ 0.21
IFT20-216ENST00000588477 HMGB4Q8WW32 186 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 FUBP3Q96I24 572 aaKnown RBP eCLIP16.36■□□□□ 0.21
IFT20-216ENST00000588477 FAM84AQ96KN4 292 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 FAM213AQ9BRX8 229 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 GTPBP2Q9BX10 602 aaKnown RBP16.36■□□□□ 0.21
IFT20-216ENST00000588477 ST6GALNAC4Q9H4F1 302 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 MAGEC2Q9UBF1 373 aaPredicted RBP16.36■□□□□ 0.21
IFT20-216ENST00000588477 PILRBQ9UKJ0 227 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 FREM2Q5SZK8 3169 aa16.36■□□□□ 0.21
IFT20-216ENST00000588477 GABRDO14764 452 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 SCAMP3O14828 347 aaKnown RBP16.35■□□□□ 0.21
IFT20-216ENST00000588477 KAT7O95251 611 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 APODP05090 189 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 PCSK1P29120 753 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 DPP6P42658 865 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 MAGEA11P43364 429 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 USP46P62068 366 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 FAM193AP78312 1265 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 BYSLQ13895 437 aaKnown RBP16.35■□□□□ 0.21
IFT20-216ENST00000588477 DUOXA1Q1HG43 343 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 MAP7D1Q3KQU3 841 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 SPDYCQ5MJ68 293 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 EOGTQ5NDL2 527 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 FAM171BQ6P995 826 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 ZNF720Q7Z2F6 126 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 C12orf40Q86WS4 652 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 ADGRF2Q8IZF7 708 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 DEFB119Q8N690 84 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 LRRC52Q8N7C0 313 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 RASSF8Q8NHQ8 419 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 LARP4BQ92615 738 aaKnown RBP16.35■□□□□ 0.21
IFT20-216ENST00000588477 SAAL1Q96ER3 474 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 RNF38Q9H0F5 515 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 GDAP2Q9NXN4 497 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 TRPM5Q9NZQ8 1165 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 SLC6A14Q9UN76 642 aa16.35■□□□□ 0.21
IFT20-216ENST00000588477 TCRBV21S2A2A0A5A6 115 aa16.34■□□□□ 0.21
IFT20-216ENST00000588477 UPK3BL1B0FP48 263 aa16.34■□□□□ 0.21
IFT20-216ENST00000588477 UPK3BL2E5RIL1 263 aa16.34■□□□□ 0.21
IFT20-216ENST00000588477 H0Y626 953 aa16.34■□□□□ 0.21
IFT20-216ENST00000588477 TRIM16O95361 564 aa16.34■□□□□ 0.21
IFT20-216ENST00000588477 PFKLP17858 780 aa16.34■□□□□ 0.21
IFT20-216ENST00000588477 BDNFP23560 247 aa16.34■□□□□ 0.21
IFT20-216ENST00000588477 GRIK1P39086 918 aa16.34■□□□□ 0.21
IFT20-216ENST00000588477 KIR2DL1P43626 348 aaPredicted RBP16.34■□□□□ 0.21
IFT20-216ENST00000588477 KCNA1Q09470 495 aa16.34■□□□□ 0.21
IFT20-216ENST00000588477 RESTQ13127 1097 aa16.34■□□□□ 0.21
IFT20-216ENST00000588477 SOWAHAQ2M3V2 549 aa16.34■□□□□ 0.21
IFT20-216ENST00000588477 HSF5Q4G112 596 aaPredicted RBP16.34■□□□□ 0.21
IFT20-216ENST00000588477 PEAR1Q5VY43 1037 aaPredicted RBP16.34■□□□□ 0.21
IFT20-216ENST00000588477 C4orf50Q6ZRC1 276 aa16.34■□□□□ 0.21
IFT20-216ENST00000588477 DENND5BQ6ZUT9 1274 aa16.34■□□□□ 0.21
IFT20-216ENST00000588477 SFR1Q86XK3 245 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms