RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 SLC22A12Q96S37 553 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 KCNK16Q96T55 309 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 BCO2Q9BYV7 579 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 ELOVL4Q9GZR5 314 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 VRTNQ9H8Y1 702 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 APOBEC3GQ9HC16 384 aaKnown RBP9.41□□□□□ -0.9
SDF2-207ENST00000588472 LTB4R2Q9NPC1 389 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 GKN1Q9NS71 199 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 TDP1Q9NUW8 608 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 SPATA6Q9NWH7 488 aaPredicted RBP9.41□□□□□ -0.9
SDF2-207ENST00000588472 THG1LQ9NWX6 298 aaKnown RBP9.41□□□□□ -0.9
SDF2-207ENST00000588472 GTSE1Q9NYZ3 720 aa9.41□□□□□ -0.9
SDF2-207ENST00000588472 ATP8B3O60423 1300 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 MYO15AQ9UKN7 3530 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 CHADO15335 359 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 STX10O60499 249 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 TADA3O75528 432 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 AP1G2O75843 785 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 HDCP19113 662 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 DDX6P26196 483 aaKnown RBP eCLIP9.4□□□□□ -0.9
SDF2-207ENST00000588472 TARSP26639 723 aaKnown RBP9.4□□□□□ -0.9
SDF2-207ENST00000588472 GTF2H1P32780 548 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 ASPAP45381 313 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 MXI1P50539 228 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 MAP3K7CLP57077 242 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 UBE2HP62256 183 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 LRMPQ12912 555 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 TAF10Q12962 218 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 CCDC40Q4G0X9 1142 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 CBWD6Q4V339 395 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 ARHGAP29Q52LW3 1261 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 WDR44Q5JSH3 913 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 CBWD3Q5JTY5 395 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 CBWD5Q5RIA9 395 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 TRIM68Q6AZZ1 485 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 CC2D1AQ6P1N0 951 aaPredicted RBP9.4□□□□□ -0.9
SDF2-207ENST00000588472 FAM35AQ86V20 835 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 NUP93Q8N1F7 819 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 SCAMP5Q8TAC9 235 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 SLC2A14Q8TDB8 520 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 FAM3CQ92520 227 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 TATDN2Q93075 761 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 TRMT2BQ96GJ1 504 aaKnown RBP9.4□□□□□ -0.9
SDF2-207ENST00000588472 DHTKD1Q96HY7 919 aaPredicted RBP9.4□□□□□ -0.9
SDF2-207ENST00000588472 C8orf48Q96LL4 319 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 MYRFLQ96LU7 910 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 GTPBP4Q9BZE4 634 aaKnown RBP9.4□□□□□ -0.9
SDF2-207ENST00000588472 EBF3Q9H4W6 596 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 KRT82Q9NSB4 513 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 TMEM30AQ9NV96 361 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 RAB20Q9NX57 234 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 TRPM5Q9NZQ8 1165 aa9.4□□□□□ -0.9
SDF2-207ENST00000588472 ARMCX3Q9UH62 379 aaPredicted RBP9.4□□□□□ -0.9
SDF2-207ENST00000588472 CHORDC1Q9UHD1 332 aaPredicted RBP9.4□□□□□ -0.9
SDF2-207ENST00000588472 MRPS17Q9Y2R5 130 aaKnown RBP9.4□□□□□ -0.9
SDF2-207ENST00000588472 TICRRQ7Z2Z1 1910 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 MED19A0JLT2 244 aaPredicted RBP9.39□□□□□ -0.91
SDF2-207ENST00000588472 PPP1R3GB7ZBB8 358 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 MAN2B1O00754 1011 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 SCAMP3O14828 347 aaKnown RBP9.39□□□□□ -0.91
SDF2-207ENST00000588472 NCAM2O15394 837 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 LMNAP02545 664 aaKnown RBP9.39□□□□□ -0.91
SDF2-207ENST00000588472 USP17L7P0C7H9 530 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 ARSAP15289 507 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 TRIM21P19474 475 aaKnown RBP9.39□□□□□ -0.91
SDF2-207ENST00000588472 BMP6P22004 513 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 YWHAQP27348 245 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 LRRC63Q05C16 580 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 FCHO2Q0JRZ9 810 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 MORC3Q14149 939 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 COBLL1Q53SF7 1204 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 PAQR9Q6ZVX9 377 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 C1orf210Q8IVY1 113 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 ELOA2Q8IYF1 753 aaPredicted RBP9.39□□□□□ -0.91
SDF2-207ENST00000588472 FUKQ8N0W3 1084 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 FBXL13Q8NEE6 735 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 FBXO32Q969P5 355 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 RMDN1Q96DB5 314 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 SMARCD1Q96GM5 515 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 HEXIM2Q96MH2 286 aaKnown RBP9.39□□□□□ -0.91
SDF2-207ENST00000588472 TWNKQ96RR1 684 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 NELL2Q99435 816 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 DUSP9Q99956 384 aaKnown RBP9.39□□□□□ -0.91
SDF2-207ENST00000588472 DDX23Q9BUQ8 820 aaKnown RBP9.39□□□□□ -0.91
SDF2-207ENST00000588472 NT5C1AQ9BXI3 368 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 NIF3L1Q9GZT8 377 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 SEMA4AQ9H3S1 761 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 LMAN1LQ9HAT1 526 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 DMAP1Q9NPF5 467 aaPredicted RBP9.39□□□□□ -0.91
SDF2-207ENST00000588472 SMPD4Q9NXE4 827 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 EHD2Q9NZN4 543 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 DMDP11532 3685 aa9.39□□□□□ -0.91
SDF2-207ENST00000588472 CACNA1HO95180 2353 aa9.38□□□□□ -0.91
SDF2-207ENST00000588472 PTPRZ1P23471 2315 aaPredicted RBP9.38□□□□□ -0.91
SDF2-207ENST00000588472 ZNF638Q14966 1978 aaKnown RBP9.38□□□□□ -0.91
SDF2-207ENST00000588472 SPECC1L-ADORA2AF8WAN1 911 aa9.38□□□□□ -0.91
SDF2-207ENST00000588472 ARNTLO00327 626 aa9.38□□□□□ -0.91
SDF2-207ENST00000588472 SLC16A3O15427 465 aaKnown RBP9.38□□□□□ -0.91
SDF2-207ENST00000588472 LAMTOR5O43504 91 aa9.38□□□□□ -0.91
SDF2-207ENST00000588472 BEST1O76090 585 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms