RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 MED7O43513 233 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 GABBR2O75899 941 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 SKILP12757 684 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 FERP16591 822 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 HMGA1P17096 107 aaKnown RBP11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 HOXB8P17481 243 aaPredicted RBP11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 KCNA5P22460 613 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 ANXA13P27216 316 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 CDC25BP30305 580 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 GPD2P43304 727 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 PDE6CP51160 858 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 BCAT1P54687 386 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 EPHB3P54753 998 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 USP46P62068 366 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 RPL10AP62906 217 aaKnown RBP11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 FMO1Q01740 532 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 BST2Q10589 180 aaKnown RBP11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 PLD1Q13393 1074 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 TRIM14Q14142 442 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 GSE1Q14687 1217 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 ASIC2Q16515 512 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 ELMSAN1Q6PJG2 1045 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 DNAJB7Q7Z6W7 309 aaPredicted RBP11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 GPR149Q86SP6 731 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 PIGZQ86VD9 579 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 PASD1Q8IV76 773 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 HS6ST3Q8IZP7 471 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 WDTC1Q8N5D0 677 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 SPC24Q8NBT2 197 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 SCAMP5Q8TAC9 235 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 OLIG1Q8TAK6 271 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 SLC35F5Q8WV83 523 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 SMG7Q92540 1137 aaKnown RBP11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 HLA-CQ95604 372 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 SPATA17Q96L03 361 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 PCDHB18PQ96TA0 734 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 LRRC3Q9BY71 257 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 HAUS4Q9H6D7 363 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 ZNF334Q9HCZ1 680 aaPredicted RBP11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 HESX1Q9UBX0 185 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 CYTH4Q9UIA0 394 aa11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 SPTBN5Q9NRC6 3674 aaKnown RBP11.32□□□□□ -0.6
SMARCA4-213ENST00000587988 PATJQ8NI35 1801 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 NRG2O14511 850 aaPredicted RBP11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 XPO1O14980 1071 aaKnown RBP11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 MFAP3LO75121 409 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 PLEKP08567 350 aaPredicted RBP11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 POU2F2P09086 479 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 PRKCIP41743 596 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 RGS7P49802 495 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 SLC5A3P53794 718 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 NTHL1P78549 312 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 CDR2Q01850 454 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 ARID5BQ14865 1188 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 HGSNATQ68CP4 663 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 PMF1Q6P1K2 205 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 WDR59Q6PJI9 974 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 DENND5BQ6ZUT9 1274 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 ZNF571Q7Z3V5 609 aaPredicted RBP11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 GRASPQ7Z6J2 395 aaPredicted RBP11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 TMC8Q8IU68 726 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 DRC7Q8IY82 874 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 NUP93Q8N1F7 819 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 ELMOD1Q8N336 334 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 SMRP1Q8NCR6 262 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 ZNF397Q8NF99 534 aaPredicted RBP11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 SYN2Q92777 582 aaPredicted RBP11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 PSMG2Q969U7 264 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 ZNF512Q96ME7 567 aaPredicted RBP11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 DNAJC7Q99615 494 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 AGPAT1Q99943 283 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 CORO1BQ9BR76 489 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 SYT11Q9BT88 431 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 NUCKS1Q9H1E3 243 aaKnown RBP11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 ADAM7Q9H2U9 754 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 PIDD1Q9HB75 910 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 CD207Q9UJ71 328 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 MAGED2Q9UNF1 606 aaPredicted RBP11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 BRWD1Q9NSI6 2320 aa11.31□□□□□ -0.6
SMARCA4-213ENST00000587988 EYSQ5T1H1 3165 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 GRXCR2A6NFK2 248 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 AKR1B15C9JRZ8 316 aaPredicted RBP11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 PIK3R2O00459 728 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 XYLBO75191 536 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 RHOP08100 348 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 CCDC172P0C7W6 258 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 SETSIPP0DME0 302 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 CSH1P0DML2 217 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 CSH2P0DML3 217 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 PTPN2P17706 415 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 HNRNPH3P31942 346 aaKnown RBP11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 CCR2P41597 374 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 PLA2G4AP47712 749 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 MRE11P49959 708 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 TFF2Q03403 129 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 ITIH3Q06033 890 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 KLHL30Q0D2K2 578 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 IFRD2Q12894 506 aaPredicted RBP11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 VEPH1Q14D04 833 aa11.3□□□□□ -0.6
SMARCA4-213ENST00000587988 TAF12Q16514 161 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms