RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 SPOPLQ6IQ16 392 aa20.27■□□□□ 0.84
CLPTM1-206ENST00000586975 FAM186BQ8IYM0 893 aa20.27■□□□□ 0.84
CLPTM1-206ENST00000586975 RIN3Q8TB24 985 aa20.27■□□□□ 0.84
CLPTM1-206ENST00000586975 C8orf48Q96LL4 319 aa20.27■□□□□ 0.84
CLPTM1-206ENST00000586975 FAM83CQ9BQN1 747 aa20.27■□□□□ 0.84
CLPTM1-206ENST00000586975 EHD2Q9NZN4 543 aa20.27■□□□□ 0.84
CLPTM1-206ENST00000586975 IKBKBO14920 756 aa20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 PSMC2P35998 433 aaKnown RBP20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 GCLMP48507 274 aa20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 ZNF268Q14587 947 aaPredicted RBP20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 PPP2R5DQ14738 602 aa20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 MTF1Q14872 753 aa20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 C1orf220Q5T0J3 134 aa20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 INTS8Q75QN2 995 aaKnown RBP20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 ACOT1Q86TX2 421 aa20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 FMR1NBQ8N0W7 255 aaPredicted RBP20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 EEF2KMTQ96G04 330 aa20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 TNIP3Q96KP6 325 aa20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 CEP295NLQ96MC4 621 aa20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 HPS4Q9NQG7 708 aa20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 COL4A2P08572 1712 aa20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 NUP210Q8TEM1 1887 aaPredicted RBP20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 F5P12259 2224 aa20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 CACNA1IQ9P0X4 2223 aa20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 ATP8B3O60423 1300 aa20.26■□□□□ 0.83
CLPTM1-206ENST00000586975 IFNAR2P48551 515 aa20.25■□□□□ 0.83
CLPTM1-206ENST00000586975 SATB1Q01826 763 aa20.25■□□□□ 0.83
CLPTM1-206ENST00000586975 Q6ZS52 159 aa20.25■□□□□ 0.83
CLPTM1-206ENST00000586975 SH3RF2Q8TEC5 729 aa20.25■□□□□ 0.83
CLPTM1-206ENST00000586975 ERCC4Q92889 916 aaPredicted RBP20.25■□□□□ 0.83
CLPTM1-206ENST00000586975 IMPG2Q9BZV3 1241 aa20.25■□□□□ 0.83
CLPTM1-206ENST00000586975 PRMT8Q9NR22 394 aaPredicted RBP20.25■□□□□ 0.83
CLPTM1-206ENST00000586975 TMEM30AQ9NV96 361 aa20.25■□□□□ 0.83
CLPTM1-206ENST00000586975 RMND1Q9NWS8 449 aa20.25■□□□□ 0.83
CLPTM1-206ENST00000586975 ZSCAN32Q9NX65 697 aa20.25■□□□□ 0.83
CLPTM1-206ENST00000586975 DUS2Q9NX74 493 aaKnown RBP20.25■□□□□ 0.83
CLPTM1-206ENST00000586975 WNT6Q9Y6F9 365 aa20.25■□□□□ 0.83
CLPTM1-206ENST00000586975 CFAP54Q96N23 3096 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 OTOL1A6NHN0 477 aaPredicted RBP20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 MAPK13O15264 365 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 ASS1P00966 412 aaKnown RBP20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 CXCL12P48061 93 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 PDE6CP51160 858 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 CCR3P51677 355 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 NDST1P52848 882 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 NOP14P78316 857 aaKnown RBP20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 TAF10Q12962 218 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 GAS6Q14393 721 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 PDGFRLQ15198 375 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 ZNF77Q15935 545 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 NFIL3Q16649 462 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 WDR44Q5JSH3 913 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 DGKKQ5KSL6 1271 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 FAM35AQ86V20 835 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 NUP93Q8N1F7 819 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 TAF4BQ92750 862 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 SLITRK1Q96PX8 696 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 KCNK16Q96T55 309 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 TTLL2Q9BWV7 592 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 GCNT4Q9P109 453 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 PCDHGA2Q9Y5H1 932 aa20.24■□□□□ 0.83
CLPTM1-206ENST00000586975 ZNF840PA6NDX5 716 aa20.23■□□□□ 0.83
CLPTM1-206ENST00000586975 SMC2O95347 1197 aa20.23■□□□□ 0.83
CLPTM1-206ENST00000586975 CCDC130P13994 396 aa20.23■□□□□ 0.83
CLPTM1-206ENST00000586975 YWHAQP27348 245 aa20.23■□□□□ 0.83
CLPTM1-206ENST00000586975 PPP3CAQ08209 521 aa20.23■□□□□ 0.83
CLPTM1-206ENST00000586975 CPA6Q8N4T0 437 aa20.23■□□□□ 0.83
CLPTM1-206ENST00000586975 TAS1R2Q8TE23 839 aa20.23■□□□□ 0.83
CLPTM1-206ENST00000586975 OSCP1Q8WVF1 389 aa20.23■□□□□ 0.83
CLPTM1-206ENST00000586975 FBXO32Q969P5 355 aa20.23■□□□□ 0.83
CLPTM1-206ENST00000586975 IER2Q9BTL4 223 aa20.23■□□□□ 0.83
CLPTM1-206ENST00000586975 FAM49BQ9NUQ9 324 aa20.23■□□□□ 0.83
CLPTM1-206ENST00000586975 SMPD4Q9NXE4 827 aa20.23■□□□□ 0.83
CLPTM1-206ENST00000586975 HMGXB4Q9UGU5 601 aa20.23■□□□□ 0.83
CLPTM1-206ENST00000586975 AP1G2O75843 785 aa20.22■□□□□ 0.83
CLPTM1-206ENST00000586975 PRCPP42785 496 aa20.22■□□□□ 0.83
CLPTM1-206ENST00000586975 AMPD2Q01433 879 aa20.22■□□□□ 0.83
CLPTM1-206ENST00000586975 GRSF1Q12849 480 aaKnown RBP eCLIP20.22■□□□□ 0.83
CLPTM1-206ENST00000586975 PAQR9Q6ZVX9 377 aa20.22■□□□□ 0.83
CLPTM1-206ENST00000586975 SPEM1Q8N4L4 309 aa20.22■□□□□ 0.83
CLPTM1-206ENST00000586975 CCDC150Q8NCX0 1101 aa20.22■□□□□ 0.83
CLPTM1-206ENST00000586975 SMARCE1Q969G3 411 aa20.22■□□□□ 0.83
CLPTM1-206ENST00000586975 SMARCD1Q96GM5 515 aa20.22■□□□□ 0.83
CLPTM1-206ENST00000586975 DMAP1Q9NPF5 467 aaPredicted RBP20.22■□□□□ 0.83
CLPTM1-206ENST00000586975 KRT82Q9NSB4 513 aa20.22■□□□□ 0.83
CLPTM1-206ENST00000586975 CHORDC1Q9UHD1 332 aaPredicted RBP20.22■□□□□ 0.83
CLPTM1-206ENST00000586975 ARHGAP26Q9UNA1 814 aa20.22■□□□□ 0.83
CLPTM1-206ENST00000586975 PTPRZ1P23471 2315 aaPredicted RBP20.22■□□□□ 0.83
CLPTM1-206ENST00000586975 WDR87Q6ZQQ6 2873 aa20.21■□□□□ 0.83
CLPTM1-206ENST00000586975 PATJQ8NI35 1801 aa20.21■□□□□ 0.83
CLPTM1-206ENST00000586975 CETN3O15182 167 aa20.21■□□□□ 0.83
CLPTM1-206ENST00000586975 RTN3O95197 1032 aaPredicted RBP20.21■□□□□ 0.83
CLPTM1-206ENST00000586975 EPB41P11171 864 aaKnown RBP20.21■□□□□ 0.83
CLPTM1-206ENST00000586975 CD58P19256 250 aa20.21■□□□□ 0.83
CLPTM1-206ENST00000586975 TRIM21P19474 475 aaKnown RBP20.21■□□□□ 0.83
CLPTM1-206ENST00000586975 ASPAP45381 313 aa20.21■□□□□ 0.83
CLPTM1-206ENST00000586975 PPP3CCP48454 512 aa20.21■□□□□ 0.83
CLPTM1-206ENST00000586975 NRLP54845 237 aa20.21■□□□□ 0.83
CLPTM1-206ENST00000586975 USP4Q13107 963 aa20.21■□□□□ 0.83
CLPTM1-206ENST00000586975 CCINQ13939 588 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms