RNA–Protein interactions for RNA: ENST00000586940.1

RFX2-206, Transcript of regulatory factor X2, human

TSL 3

Gene RFX2, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-206	ENST00000586940	POU5F1	Q01860	360 aa	Known RBP	13.46	□□□□□ -0.25
RFX2-206	ENST00000586940	SYT12	Q8IV01	421 aa		13.46	□□□□□ -0.25
RFX2-206	ENST00000586940	PDCL2	Q8N4E4	241 aa		13.46	□□□□□ -0.25
RFX2-206	ENST00000586940	RASSF8	Q8NHQ8	419 aa		13.46	□□□□□ -0.25
RFX2-206	ENST00000586940	GPT2	Q8TD30	523 aa		13.46	□□□□□ -0.25
RFX2-206	ENST00000586940	RLN3	Q8WXF3	142 aa		13.46	□□□□□ -0.25
RFX2-206	ENST00000586940	SLC22A12	Q96S37	553 aa		13.46	□□□□□ -0.25
RFX2-206	ENST00000586940	LINC00597	Q9H2U6	94 aa		13.46	□□□□□ -0.25
RFX2-206	ENST00000586940	GCNT4	Q9P109	453 aa		13.46	□□□□□ -0.25
RFX2-206	ENST00000586940	GTF3C4	Q9UKN8	822 aa		13.46	□□□□□ -0.25
RFX2-206	ENST00000586940	KLK13	Q9UKR3	277 aa		13.46	□□□□□ -0.25
RFX2-206	ENST00000586940	ARHGAP26	Q9UNA1	814 aa		13.46	□□□□□ -0.25
RFX2-206	ENST00000586940	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	SPAAR	A0A1B0GVQ0	90 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	C2orf78	A6NCI8	922 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	GOLGA6L4	A6NEF3	574 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	PPP6R2	O75170	966 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	POLR2B	P30876	1174 aa	Known RBP	13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	P2RY2	P41231	377 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	ZNF131	P52739	623 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	TFAM	Q00059	246 aa	Known RBP	13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	HSF5	Q4G112	596 aa	Predicted RBP	13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	EOGT	Q5NDL2	527 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	LYSMD4	Q5XG99	296 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	TMEFF1	Q8IYR6	380 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	TMEM86A	Q8N2M4	240 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	PGBD3	Q8N328	593 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	ALLC	Q8N6M5	410 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	TXNDC5	Q8NBS9	432 aa	Known RBP	13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	OLIG1	Q8TAK6	271 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	SPATA18	Q8TC71	538 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	POMGNT1	Q8WZA1	660 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	RAD54L	Q92698	747 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	FUBP3	Q96I24	572 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	L1RE1	Q9UN81	338 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	AGAP1	Q9UPQ3	857 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	CHD8	Q9HCK8	2581 aa		13.45	□□□□□ -0.26
RFX2-206	ENST00000586940	ATXN2	Q99700	1313 aa	Known RBP	13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	TISP43	B9A030	160 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	KLF8	O95600	359 aa	Predicted RBP	13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	APOD	P05090	189 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	CFI	P05156	583 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	PCSK1	P29120	753 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	TIE1	P35590	1138 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	ME1	P48163	572 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	LHX1	P48742	406 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	MCM6	Q14566	821 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	POSTN	Q15063	836 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	CFAP221	Q4G0U5	840 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	SPDYC	Q5MJ68	293 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	SLC23A3	Q6PIS1	610 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	TMEM92	Q6UXU6	159 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	CACTIN	Q8WUQ7	758 aa	Known RBP	13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	PNKP	Q96T60	521 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	GTPBP2	Q9BX10	602 aa	Known RBP	13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	TRPM5	Q9NZQ8	1165 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	STYXL1	Q9Y6J8	313 aa		13.44	□□□□□ -0.26
RFX2-206	ENST00000586940	EML5	Q05BV3	1969 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	CFAP47	Q6ZTR5	3102 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940		A0A1W2PQ27	194 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940		A0A1W2PQ64	194 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940		A0A1W2PQD8	194 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	TCRBV21S2A2	A0A5A6	115 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	UPK3BL1	B0FP48	263 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	UPK3BL2	E5RIL1	263 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	LEFTY2	O00292	366 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	SLC9A3R1	O14745	358 aa	Predicted RBP	13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	ITGB3	P05106	788 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	KRT19	P08727	400 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	ANK1	P16157	1881 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	PFKL	P17858	780 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	ANXA13	P27216	316 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	PTGER3	P43115	390 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	GFPT1	Q06210	699 aa	Predicted RBP	13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	SEMA3B	Q13214	749 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	HNRNPD	Q14103	355 aa	Known RBP	13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	C4orf50	Q6ZRC1	276 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	ADGRF2	Q8IZF7	708 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	LRRC52	Q8N7C0	313 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	KRI1	Q8N9T8	703 aa	Known RBP	13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	CEP76	Q8TAP6	659 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	HMGB4	Q8WW32	186 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	LARP4B	Q92615	738 aa	Known RBP	13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	FNBP1	Q96RU3	617 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	TMEM74B	Q9NUR3	256 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	EHD2	Q9NZN4	543 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	SLC6A14	Q9UN76	642 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	SNX9	Q9Y5X1	595 aa		13.43	□□□□□ -0.26
RFX2-206	ENST00000586940	SPAG17	Q6Q759	2223 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940		A0A087X0B3	334 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	SGK1	O00141	431 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	AP5Z1	O43299	807 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	CUTA	O60888	179 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	OPHN1	O60890	802 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	KAT7	O95251	611 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	LDHA	P00338	332 aa	Known RBP	13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	CYP17A1	P05093	508 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms