RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, human

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-222	ENST00000585867	SLC8B1	Q6J4K2	584 aa		18.85	■□□□□ 0.61
RBFOX1-222	ENST00000585867		Q7L0L9	218 aa		18.85	■□□□□ 0.61
RBFOX1-222	ENST00000585867	MON1B	Q7L1V2	547 aa		18.85	■□□□□ 0.61
RBFOX1-222	ENST00000585867	DNAAF5	Q86Y56	855 aa		18.85	■□□□□ 0.61
RBFOX1-222	ENST00000585867	CRYBG2	Q8N1P7	616 aa		18.85	■□□□□ 0.61
RBFOX1-222	ENST00000585867	TPCN2	Q8NHX9	752 aa		18.85	■□□□□ 0.61
RBFOX1-222	ENST00000585867	ARHGEF26	Q96DR7	871 aa		18.85	■□□□□ 0.61
RBFOX1-222	ENST00000585867	SYT15	Q9BQS2	421 aa		18.85	■□□□□ 0.61
RBFOX1-222	ENST00000585867	ZCWPW1	Q9H0M4	648 aa		18.85	■□□□□ 0.61
RBFOX1-222	ENST00000585867	ADAM22	Q9P0K1	906 aa		18.85	■□□□□ 0.61
RBFOX1-222	ENST00000585867	CNOT8	Q9UFF9	292 aa	Known RBP	18.85	■□□□□ 0.61
RBFOX1-222	ENST00000585867	SCIN	Q9Y6U3	715 aa		18.85	■□□□□ 0.61
RBFOX1-222	ENST00000585867	MYH10	P35580	1976 aa		18.85	■□□□□ 0.61
RBFOX1-222	ENST00000585867	LAMA3	Q16787	3333 aa		18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867		O00370	1275 aa		18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867	PALM	O75781	387 aa		18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867	CPB1	P15086	417 aa		18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867	PTPN1	P18031	435 aa	Known RBP	18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867	KLRC2	P26717	231 aa		18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867	PSMC1	P62191	440 aa	Known RBP	18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867	LCLAT1	Q6UWP7	414 aa		18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867	ADGRD2	Q7Z7M1	963 aa		18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867	ACOT1	Q86TX2	421 aa		18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867	LRRTM3	Q86VH5	581 aa		18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867	DCP1B	Q8IZD4	617 aa	Known RBP	18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867	ZSWIM1	Q9BR11	485 aa		18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867	MIS12	Q9H081	205 aa		18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867	MRPL47	Q9HD33	250 aa	Known RBP	18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867	STRIP2	Q9ULQ0	834 aa		18.84	■□□□□ 0.61
RBFOX1-222	ENST00000585867	MYO9B	Q13459	2157 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	GRID2IP	A4D2P6	1211 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867		M0QYV0	167 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	PER2	O15055	1255 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	FANCG	O15287	622 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MICAL2	O94851	1124 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ADH1A	P07327	375 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	CFH	P08603	1231 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	IGFBP4	P22692	258 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MMP8	P22894	467 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ROR1	Q01973	937 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	RAB33A	Q14088	237 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ADGRE1	Q14246	886 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ARHGAP17	Q68EM7	881 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	RBM23	Q86U06	439 aa	Known RBP	18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ERICH1	Q86X53	443 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	C1orf131	Q8NDD1	294 aa	Known RBP	18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	GAS2L1	Q99501	681 aa	Predicted RBP	18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	LPIN3	Q9BQK8	851 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	TLE6	Q9H808	572 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	L2HGDH	Q9H9P8	463 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	CRTAC1	Q9NQ79	661 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	HESX1	Q9UBX0	185 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	LCMT1	Q9UIC8	334 aa		18.83	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MYBPHL	A2RUH7	354 aa		18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SETSIP	P0DME0	302 aa		18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	POU3F3	P20264	500 aa	Predicted RBP	18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SNX16	P57768	344 aa		18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	GPR17	Q13304	367 aa		18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SLC39A12	Q504Y0	691 aa		18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	PAPD7	Q5XG87	772 aa	Known RBP	18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	C11orf63	Q6NUN7	778 aa		18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	DENND1B	Q6P3S1	775 aa		18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	FAM171B	Q6P995	826 aa		18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	DEFB123	Q8N688	67 aa		18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	B3GALNT2	Q8NCR0	500 aa		18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ZNF564	Q8TBZ8	553 aa	Predicted RBP	18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	C11orf70	Q9BRQ4	267 aa		18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	NUP85	Q9BW27	656 aa		18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	NSUN3	Q9H649	340 aa	Known RBP	18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MTCH2	Q9Y6C9	303 aa		18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ATG2A	Q2TAZ0	1938 aa		18.82	■□□□□ 0.6
RBFOX1-222	ENST00000585867	WDR27	A2RRH5	827 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	CLASP2	O75122	1294 aa	Known RBP	18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ATP1A1	P05023	1023 aa	Known RBP	18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	PRLR	P16471	622 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	CDR1	P51861	262 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	CCDC142	Q17RM4	750 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MDH1B	Q5I0G3	518 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	RNF19B	Q6ZMZ0	732 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MMS22L	Q6ZRQ5	1243 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SLFN11	Q7Z7L1	901 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	DAAM2	Q86T65	1068 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	LRRC57	Q8N9N7	239 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ZNF461	Q8TAF7	563 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MYCBPAP	Q8TBZ2	947 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	PPP2R3C	Q969Q6	453 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	PKMYT1	Q99640	499 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	OSGEP	Q9NPF4	335 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	TMLHE	Q9NVH6	421 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	TSPAN16	Q9UKR8	245 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MRFAP1	Q9Y605	127 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SAR1B	Q9Y6B6	198 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	CHD7	Q9P2D1	2997 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ABLIM3	O94929	683 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	TCP1	P17987	556 aa	Known RBP	18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SSTR3	P32745	418 aa	Predicted RBP	18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	NRIP1	P48552	1158 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MAPRE1	Q15691	268 aa	Known RBP	18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	GOLGA7B	Q2TAP0	167 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MEI1	Q5TIA1	1274 aa		18.81	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms