RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.95□□□□□ -0.66
LIG3-203ENST00000585370 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.95□□□□□ -0.66
LIG3-203ENST00000585370 ARL5CA6NH57 179 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 M0QYV0 167 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 FGGP02679 453 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 KRT3P12035 628 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 DESP17661 470 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 TNFRSF8P28908 595 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 SCNN1AP37088 669 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 ACADSBP45954 432 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 SLC8A3P57103 927 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 PSMC1P62191 440 aaKnown RBP10.95□□□□□ -0.66
LIG3-203ENST00000585370 FAM189BP81408 668 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 GRIK3Q13003 919 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 PPP1R15BQ5SWA1 713 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 CC2D1AQ6P1N0 951 aaPredicted RBP10.95□□□□□ -0.66
LIG3-203ENST00000585370 AGMOQ6ZNB7 445 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 SLC24A5Q71RS6 500 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 ECHDC2Q86YB7 292 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 RCOR2Q8IZ40 523 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 ANKRD52Q8NB46 1076 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 GSTCDQ8NEC7 633 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 RSPH1Q8WYR4 309 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 SEPT8Q92599 483 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 TOP1MTQ969P6 601 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 MCRS1Q96EZ8 462 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 GAD1Q99259 594 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 LRRC1Q9BTT6 524 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 CXCL16Q9H2A7 254 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 EPHX3Q9H6B9 360 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 HOMER3Q9NSC5 361 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.95□□□□□ -0.66
LIG3-203ENST00000585370 DDX56Q9NY93 547 aaKnown RBP10.95□□□□□ -0.66
LIG3-203ENST00000585370 STIM2Q9P246 746 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 TSPAN16Q9UKR8 245 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 DSEQ9UL01 958 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 TRIOO75962 3097 aa10.95□□□□□ -0.66
LIG3-203ENST00000585370 PODXLO00592 558 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 CYB561D2O14569 222 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 GABRDO14764 452 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 PPEF2O14830 753 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 MLH1P40692 756 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 COPS2P61201 443 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 SOX4Q06945 474 aaPredicted RBP10.94□□□□□ -0.66
LIG3-203ENST00000585370 PDCLQ13371 301 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 HADHQ16836 314 aaKnown RBP10.94□□□□□ -0.66
LIG3-203ENST00000585370 PTPN20Q4JDL3 420 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 PKDCCQ504Y2 493 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 CCNI2Q6ZMN8 369 aaPredicted RBP10.94□□□□□ -0.66
LIG3-203ENST00000585370 TMEM110Q86TL2 294 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 ACOT1Q86TX2 421 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 ZNF598Q86UK7 904 aaKnown RBP10.94□□□□□ -0.66
LIG3-203ENST00000585370 XYLT1Q86Y38 959 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 KATNAL2Q8IYT4 538 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 ADGRF2Q8IZF7 708 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 FBXO22Q8NEZ5 403 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 EXD1Q8NHP7 514 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 SLC35F5Q8WV83 523 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 KBTBD7Q8WVZ9 684 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 ALG3Q92685 438 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 KHSRPQ92945 711 aaKnown RBP eCLIP10.94□□□□□ -0.66
LIG3-203ENST00000585370 BTBD6Q96KE9 485 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 HSFY1Q96LI6 401 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 ZFP42Q96MM3 310 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 PNKPQ96T60 521 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 KRT12Q99456 494 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 SLC4A5Q9BY07 1137 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 ELAC1Q9H777 363 aaKnown RBP10.94□□□□□ -0.66
LIG3-203ENST00000585370 HMGXB4Q9UGU5 601 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 CHORDC1Q9UHD1 332 aaPredicted RBP10.94□□□□□ -0.66
LIG3-203ENST00000585370 FEZ2Q9UHY8 353 aaPredicted RBP10.94□□□□□ -0.66
LIG3-203ENST00000585370 L1RE1Q9UN81 338 aa10.94□□□□□ -0.66
LIG3-203ENST00000585370 FAM187AA6NFU0 413 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 C9IYK1 514 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 FSCN2O14926 492 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 SPTLC1O15269 473 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 SART1O43290 800 aaKnown RBP10.93□□□□□ -0.66
LIG3-203ENST00000585370 MGEA5O60502 916 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 UPP2O95045 317 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 ZRANB2O95218 330 aaKnown RBP eCLIP10.93□□□□□ -0.66
LIG3-203ENST00000585370 CHRNA3P32297 505 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 SSTR3P32745 418 aaPredicted RBP10.93□□□□□ -0.66
LIG3-203ENST00000585370 RPL34P49207 117 aaKnown RBP10.93□□□□□ -0.66
LIG3-203ENST00000585370 AARSP49588 968 aaKnown RBP eCLIP10.93□□□□□ -0.66
LIG3-203ENST00000585370 BCAT1P54687 386 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 RNASE9P60153 205 aaKnown RBP10.93□□□□□ -0.66
LIG3-203ENST00000585370 VSNL1P62760 191 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 BST2Q10589 180 aaKnown RBP10.93□□□□□ -0.66
LIG3-203ENST00000585370 TUSC3Q13454 348 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 DHX34Q14147 1143 aaKnown RBP10.93□□□□□ -0.66
LIG3-203ENST00000585370 GOLGA7BQ2TAP0 167 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 PPP1R26Q5T8A7 1209 aaPredicted RBP10.93□□□□□ -0.66
LIG3-203ENST00000585370 DCAF12L1Q5VU92 463 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 DCLRE1AQ6PJP8 1040 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 DSTYKQ6XUX3 929 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 ARCQ7LC44 396 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 HDXQ7Z353 690 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 POLNQ7Z5Q5 900 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 METTL23Q86XA0 190 aa10.93□□□□□ -0.66
LIG3-203ENST00000585370 SLC13A5Q86YT5 568 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms