RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 ABL1P00519 1130 aa21.79■■□□□ 1.08
TOP3A-219ENST00000584887 PTPN1P18031 435 aaKnown RBP21.79■■□□□ 1.08
TOP3A-219ENST00000584887 PXNP49023 591 aaPredicted RBP21.79■■□□□ 1.08
TOP3A-219ENST00000584887 IFRD2Q12894 506 aaPredicted RBP21.79■■□□□ 1.08
TOP3A-219ENST00000584887 C12orf56Q8IXR9 622 aa21.79■■□□□ 1.08
TOP3A-219ENST00000584887 OSCP1Q8WVF1 389 aa21.79■■□□□ 1.08
TOP3A-219ENST00000584887 ATP2A3Q93084 1043 aa21.79■■□□□ 1.08
TOP3A-219ENST00000584887 DLL3Q9NYJ7 618 aa21.79■■□□□ 1.08
TOP3A-219ENST00000584887 GCNT4Q9P109 453 aa21.79■■□□□ 1.08
TOP3A-219ENST00000584887 SLC8A2Q9UPR5 921 aa21.79■■□□□ 1.08
TOP3A-219ENST00000584887 NME7Q9Y5B8 376 aa21.79■■□□□ 1.08
TOP3A-219ENST00000584887 DMXL1Q9Y485 3027 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 MED19A0JLT2 244 aaPredicted RBP21.78■■□□□ 1.08
TOP3A-219ENST00000584887 A8MXQ7 604 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 RNF40O75150 1001 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 SLFN14P0C7P3 912 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 CNR2P34972 360 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 GJA4P35212 333 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 PDE6CP51160 858 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 GALK1P51570 392 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 SCARA5Q6ZMJ2 495 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 GOLGA5Q8TBA6 731 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 SYAP1Q96A49 352 aaPredicted RBP21.78■■□□□ 1.08
TOP3A-219ENST00000584887 EXOC4Q96A65 974 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 PAGE5Q96GU1 130 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 ZNF518BQ9C0D4 1074 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 GZF1Q9H116 711 aaPredicted RBP21.78■■□□□ 1.08
TOP3A-219ENST00000584887 SMYD3Q9H7B4 428 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 FBRSL1Q9HCM7 1045 aaKnown RBP21.78■■□□□ 1.08
TOP3A-219ENST00000584887 FRYLO94915 3013 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 ANAPC1Q9H1A4 1944 aa21.78■■□□□ 1.08
TOP3A-219ENST00000584887 PTPRDP23468 1912 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 GREB1Q4ZG55 1949 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 CLDN5O00501 218 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 ACTN4O43707 911 aaKnown RBP21.77■■□□□ 1.08
TOP3A-219ENST00000584887 ATG13O75143 517 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 RETP07949 1114 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 PSMD2Q13200 908 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 ZNF699Q32M78 642 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 WDR5BQ86VZ2 330 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 B3GALNT2Q8NCR0 500 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 PLEKHO2Q8TD55 490 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 ELMO3Q96BJ8 720 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 ELOVL4Q9GZR5 314 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 POLR3BQ9NW08 1133 aaPredicted RBP21.77■■□□□ 1.08
TOP3A-219ENST00000584887 EHD2Q9NZN4 543 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 RCOR1Q9UKL0 485 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 ARHGAP26Q9UNA1 814 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 NCOR2Q9Y618 2525 aa21.77■■□□□ 1.08
TOP3A-219ENST00000584887 A0A1B0GVL5 298 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 PRR5-ARHGAP8B1AHC4 643 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 KLRC4O43908 158 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 PFKFB1P16118 471 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 DRD1P21728 446 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 ATICP31939 592 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 RAP1GAPP47736 663 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 CACNA2D1P54289 1103 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 ARHGAP8P85298 464 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 STK4Q13043 487 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 NR1H3Q13133 447 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 EML3Q32P44 896 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 KMT5BQ4FZB7 885 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 TDRD10Q5VZ19 366 aaKnown RBP21.76■■□□□ 1.07
TOP3A-219ENST00000584887 KIAA0895Q8NCT3 520 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 CD101Q93033 1021 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 C8orf48Q96LL4 319 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 CEP295NLQ96MC4 621 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 MED10Q9BTT4 135 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 B3GNT5Q9BYG0 378 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 XYLT2Q9H1B5 865 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 LINC00597Q9H2U6 94 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 SMPD4Q9NXE4 827 aa21.76■■□□□ 1.07
TOP3A-219ENST00000584887 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.76■■□□□ 1.07
TOP3A-219ENST00000584887 LRRIQ3A6PVS8 624 aaPredicted RBP21.75■■□□□ 1.07
TOP3A-219ENST00000584887 SCAMP3O14828 347 aaKnown RBP21.75■■□□□ 1.07
TOP3A-219ENST00000584887 SDHBP21912 280 aa21.75■■□□□ 1.07
TOP3A-219ENST00000584887 TGM1P22735 817 aa21.75■■□□□ 1.07
TOP3A-219ENST00000584887 HOXA6P31267 233 aa21.75■■□□□ 1.07
TOP3A-219ENST00000584887 TAF10Q12962 218 aa21.75■■□□□ 1.07
TOP3A-219ENST00000584887 NCOA4Q13772 614 aa21.75■■□□□ 1.07
TOP3A-219ENST00000584887 ZNF667Q5HYK9 610 aa21.75■■□□□ 1.07
TOP3A-219ENST00000584887 FAM160A2Q8N612 972 aaPredicted RBP21.75■■□□□ 1.07
TOP3A-219ENST00000584887 CHAMP1Q96JM3 812 aa21.75■■□□□ 1.07
TOP3A-219ENST00000584887 HHIPQ96QV1 700 aa21.75■■□□□ 1.07
TOP3A-219ENST00000584887 TTLL2Q9BWV7 592 aa21.75■■□□□ 1.07
TOP3A-219ENST00000584887 ZNF840PA6NDX5 716 aa21.74■■□□□ 1.07
TOP3A-219ENST00000584887 LEFTY2O00292 366 aa21.74■■□□□ 1.07
TOP3A-219ENST00000584887 NFATC1O95644 943 aa21.74■■□□□ 1.07
TOP3A-219ENST00000584887 STAU1O95793 577 aaKnown RBP21.74■■□□□ 1.07
TOP3A-219ENST00000584887 FAM163BP0C2L3 166 aa21.74■■□□□ 1.07
TOP3A-219ENST00000584887 CCDC192P0DO97 292 aa21.74■■□□□ 1.07
TOP3A-219ENST00000584887 CDH8P55286 799 aa21.74■■□□□ 1.07
TOP3A-219ENST00000584887 NOP14P78316 857 aaKnown RBP21.74■■□□□ 1.07
TOP3A-219ENST00000584887 RPLP0P6Q8NHW5 317 aa21.74■■□□□ 1.07
TOP3A-219ENST00000584887 PARD3BQ8TEW8 1205 aa21.74■■□□□ 1.07
TOP3A-219ENST00000584887 SPATA32Q96LK8 384 aa21.74■■□□□ 1.07
TOP3A-219ENST00000584887 SLITRK1Q96PX8 696 aa21.74■■□□□ 1.07
TOP3A-219ENST00000584887 TMEM30AQ9NV96 361 aa21.74■■□□□ 1.07
TOP3A-219ENST00000584887 ATP8B3O60423 1300 aa21.74■■□□□ 1.07
TOP3A-219ENST00000584887 RALGAPA1Q6GYQ0 2036 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms