RNA–Protein interactions for RNA: ENST00000584876.1

TRAPPC8-213, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-213ENST00000584876 PDGFRBP09619 1106 aa24.55■■□□□ 1.52
TRAPPC8-213ENST00000584876 DENND5BQ6ZUT9 1274 aa24.55■■□□□ 1.52
TRAPPC8-213ENST00000584876 CEP295NLQ96MC4 621 aa24.55■■□□□ 1.52
TRAPPC8-213ENST00000584876 EBF1Q9UH73 591 aa24.55■■□□□ 1.52
TRAPPC8-213ENST00000584876 MTMR6Q9Y217 621 aa24.55■■□□□ 1.52
TRAPPC8-213ENST00000584876 ABCA7Q8IZY2 2146 aa24.55■■□□□ 1.52
TRAPPC8-213ENST00000584876 MYOFQ9NZM1 2061 aa24.54■■□□□ 1.52
TRAPPC8-213ENST00000584876 TRIM66O15016 1216 aa24.54■■□□□ 1.52
TRAPPC8-213ENST00000584876 DCLK1O15075 740 aa24.54■■□□□ 1.52
TRAPPC8-213ENST00000584876 RHOBTB1O94844 696 aa24.54■■□□□ 1.52
TRAPPC8-213ENST00000584876 PFKLP17858 780 aa24.54■■□□□ 1.52
TRAPPC8-213ENST00000584876 USP46P62068 366 aa24.54■■□□□ 1.52
TRAPPC8-213ENST00000584876 CCDC26Q8TAB7 109 aa24.54■■□□□ 1.52
TRAPPC8-213ENST00000584876 PCED1BQ96HM7 432 aa24.54■■□□□ 1.52
TRAPPC8-213ENST00000584876 LRRC27Q9C0I9 530 aa24.54■■□□□ 1.52
TRAPPC8-213ENST00000584876 KIAA1586Q9HCI6 787 aa24.54■■□□□ 1.52
TRAPPC8-213ENST00000584876 LEFTY2O00292 366 aa24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 TM4SF5O14894 197 aa24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 NASPP49321 788 aaPredicted RBP24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 DGKEP52429 567 aa24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 ZXDBP98169 803 aa24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 STK38Q15208 465 aa24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 ST3GAL2Q16842 350 aa24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 MDH1BQ5I0G3 518 aa24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 TRAPPC11Q7Z392 1133 aa24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 TSTD1Q8NFU3 115 aa24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 MYCBPAPQ8TBZ2 947 aa24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 CHAMP1Q96JM3 812 aa24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 TTLL2Q9BWV7 592 aa24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 SNX25Q9H3E2 840 aa24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 ZSCAN16Q9H4T2 348 aaPredicted RBP24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 EHD2Q9NZN4 543 aa24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 LAMA1P25391 3075 aa24.53■■□□□ 1.52
TRAPPC8-213ENST00000584876 EIF3DO15371 548 aaKnown RBP eCLIP24.52■■□□□ 1.52
TRAPPC8-213ENST00000584876 DLATP10515 647 aaKnown RBP24.52■■□□□ 1.52
TRAPPC8-213ENST00000584876 HOXD13P35453 343 aa24.52■■□□□ 1.52
TRAPPC8-213ENST00000584876 OPRD1P41143 372 aa24.52■■□□□ 1.52
TRAPPC8-213ENST00000584876 SEC13P55735 322 aa24.52■■□□□ 1.52
TRAPPC8-213ENST00000584876 ASIC1P78348 528 aa24.52■■□□□ 1.52
TRAPPC8-213ENST00000584876 CREB5Q02930 508 aa24.52■■□□□ 1.52
TRAPPC8-213ENST00000584876 N4BP2L1Q5TBK1 243 aaPredicted RBP24.52■■□□□ 1.52
TRAPPC8-213ENST00000584876 TCEAL6Q6IPX3 200 aa24.52■■□□□ 1.52
TRAPPC8-213ENST00000584876 RDH13Q8NBN7 331 aa24.52■■□□□ 1.52
TRAPPC8-213ENST00000584876 USP33Q8TEY7 942 aa24.52■■□□□ 1.52
TRAPPC8-213ENST00000584876 TCEAL3Q969E4 200 aa24.52■■□□□ 1.52
TRAPPC8-213ENST00000584876 MRPL45Q9BRJ2 306 aaKnown RBP24.52■■□□□ 1.52
TRAPPC8-213ENST00000584876 TRIM9Q9C026 710 aa24.52■■□□□ 1.52
TRAPPC8-213ENST00000584876 KBTBD4Q9NVX7 518 aa24.52■■□□□ 1.52
TRAPPC8-213ENST00000584876 F8VP50 259 aa24.51■■□□□ 1.51
TRAPPC8-213ENST00000584876 TNNI1P19237 187 aa24.51■■□□□ 1.51
TRAPPC8-213ENST00000584876 GBP1P32455 592 aa24.51■■□□□ 1.51
TRAPPC8-213ENST00000584876 GNL1P36915 607 aaPredicted RBP24.51■■□□□ 1.51
TRAPPC8-213ENST00000584876 E2F4Q16254 413 aa24.51■■□□□ 1.51
TRAPPC8-213ENST00000584876 SNRNP35Q16560 246 aaKnown RBP24.51■■□□□ 1.51
TRAPPC8-213ENST00000584876 C2orf27AQ580R0 203 aa24.51■■□□□ 1.51
TRAPPC8-213ENST00000584876 RNF43Q68DV7 783 aa24.51■■□□□ 1.51
TRAPPC8-213ENST00000584876 HS2ST1Q7LGA3 356 aa24.51■■□□□ 1.51
TRAPPC8-213ENST00000584876 OR6B3Q8NGW1 331 aa24.51■■□□□ 1.51
TRAPPC8-213ENST00000584876 INTS4Q96HW7 963 aaKnown RBP24.51■■□□□ 1.51
TRAPPC8-213ENST00000584876 FNBP1Q96RU3 617 aa24.51■■□□□ 1.51
TRAPPC8-213ENST00000584876 CUEDC2Q9H467 287 aa24.51■■□□□ 1.51
TRAPPC8-213ENST00000584876 FOXD4L1Q9NU39 408 aa24.51■■□□□ 1.51
TRAPPC8-213ENST00000584876 ANGPTL2Q9UKU9 493 aa24.51■■□□□ 1.51
TRAPPC8-213ENST00000584876 ZNF840PA6NDX5 716 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 PPP3CCP48454 512 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 NOP14P78316 857 aaKnown RBP24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 SLC7A9P82251 487 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 GAB4Q2WGN9 574 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 FAM26FQ5R3K3 315 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 EPM2AIP1Q7L775 607 aaPredicted RBP24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 FILIP1Q7Z7B0 1213 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 LINC00301Q8NCQ3 95 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 DHX58Q96C10 678 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 C8orf48Q96LL4 319 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 CGRRF1Q99675 332 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 EDEM2Q9BV94 578 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 TPSD1Q9BZJ3 242 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 AGPAT3Q9NRZ7 376 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 INVSQ9Y283 1065 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 NME7Q9Y5B8 376 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 CPQQ9Y646 472 aa24.5■■□□□ 1.51
TRAPPC8-213ENST00000584876 BCLAF3A2AJT9 711 aaKnown RBP24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 K7EQS6 105 aa24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 STX6O43752 255 aa24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 TACC1O75410 805 aa24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 CAVIN2O95810 425 aa24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 ABL1P00519 1130 aa24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 CST3P01034 146 aaPredicted RBP24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 CYP17A1P05093 508 aa24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 PMLP29590 882 aa24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 CYP2J2P51589 502 aa24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 TNNC1P63316 161 aa24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 AMPD3Q01432 767 aa24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 PSMD6Q15008 389 aa24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 USP39Q53GS9 565 aaKnown RBP24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 ZNF507Q8TCN5 953 aa24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 CCDC127Q96BQ5 260 aa24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 LSM14BQ9BX40 385 aaKnown RBP24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 RNF38Q9H0F5 515 aa24.49■■□□□ 1.51
TRAPPC8-213ENST00000584876 SMPD4Q9NXE4 827 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms