RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 TXNDC8Q6A555 127 aa14□□□□□ -0.17
ERBB2-220ENST00000584684 FOXR2Q6PJQ5 311 aa14□□□□□ -0.17
ERBB2-220ENST00000584684 SCARA5Q6ZMJ2 495 aa14□□□□□ -0.17
ERBB2-220ENST00000584684 MAMSTRQ6ZN01 415 aa14□□□□□ -0.17
ERBB2-220ENST00000584684 FAM35AQ86V20 835 aa14□□□□□ -0.17
ERBB2-220ENST00000584684 ALYREFQ86V81 257 aaKnown RBP14□□□□□ -0.17
ERBB2-220ENST00000584684 RALGPS2Q86X27 583 aaPredicted RBP14□□□□□ -0.17
ERBB2-220ENST00000584684 ADSSL1Q8N142 457 aa14□□□□□ -0.17
ERBB2-220ENST00000584684 TAS1R2Q8TE23 839 aa14□□□□□ -0.17
ERBB2-220ENST00000584684 B3GNT5Q9BYG0 378 aa14□□□□□ -0.17
ERBB2-220ENST00000584684 NIF3L1Q9GZT8 377 aa14□□□□□ -0.17
ERBB2-220ENST00000584684 FAM124BQ9H5Z6 455 aaPredicted RBP14□□□□□ -0.17
ERBB2-220ENST00000584684 CYP3A43Q9HB55 503 aa14□□□□□ -0.17
ERBB2-220ENST00000584684 TMEM30AQ9NV96 361 aa14□□□□□ -0.17
ERBB2-220ENST00000584684 GCNT4Q9P109 453 aa14□□□□□ -0.17
ERBB2-220ENST00000584684 CCL26Q9Y258 94 aa14□□□□□ -0.17
ERBB2-220ENST00000584684 TRAV19A0A0A6YYK7 116 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 STX10O60499 249 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 USP17L7P0C7H9 530 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 EPB41P11171 864 aaKnown RBP13.99□□□□□ -0.17
ERBB2-220ENST00000584684 CTHP32929 405 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 CACNA2D1P54289 1103 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 CDH8P55286 799 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 USP46P62068 366 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 FKBP3Q00688 224 aaKnown RBP13.99□□□□□ -0.17
ERBB2-220ENST00000584684 KRT39Q6A163 491 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 MAML2Q8IZL2 1156 aaPredicted RBP13.99□□□□□ -0.17
ERBB2-220ENST00000584684 CRYBG2Q8N1P7 616 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 KIAA1958Q8N8K9 716 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 FAM3CQ92520 227 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 SMARCD1Q96GM5 515 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 TSG101Q99816 390 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 FAM83CQ9BQN1 747 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 SMG9Q9H0W8 520 aaKnown RBP13.99□□□□□ -0.17
ERBB2-220ENST00000584684 CHRDQ9H2X0 955 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 DMAP1Q9NPF5 467 aaPredicted RBP13.99□□□□□ -0.17
ERBB2-220ENST00000584684 PRMT8Q9NR22 394 aaPredicted RBP13.99□□□□□ -0.17
ERBB2-220ENST00000584684 FBXO4Q9UKT5 387 aa13.99□□□□□ -0.17
ERBB2-220ENST00000584684 SPECC1L-ADORA2AF8WAN1 911 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 PSMA7O14818 248 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 CLSTN1O94985 981 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 RTN3O95197 1032 aaPredicted RBP13.98□□□□□ -0.17
ERBB2-220ENST00000584684 OLFM2O95897 454 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 CKMP06732 381 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 TRIM21P19474 475 aaKnown RBP13.98□□□□□ -0.17
ERBB2-220ENST00000584684 MXI1P50539 228 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 NDST1P52848 882 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 STIM1Q13586 685 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 ZNF77Q15935 545 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 ITPRIPL2Q3MIP1 535 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 SPOPLQ6IQ16 392 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 PAQR9Q6ZVX9 377 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 FUKQ8N0W3 1084 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 RIN3Q8TB24 985 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 OVCA2Q8WZ82 227 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 ZFYVE19Q96K21 471 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 SEMA4AQ9H3S1 761 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 APOBEC3GQ9HC16 384 aaKnown RBP13.98□□□□□ -0.17
ERBB2-220ENST00000584684 IL37Q9NZH6 218 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 TRPM5Q9NZQ8 1165 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 HMGXB4Q9UGU5 601 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 ARHGAP26Q9UNA1 814 aa13.98□□□□□ -0.17
ERBB2-220ENST00000584684 CFAP54Q96N23 3096 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 OTOGLQ3ZCN5 2332 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 FAM92AA1XBS5 289 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 C2orf78A6NCI8 922 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 ZNF840PA6NDX5 716 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 CLDN5O00501 218 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 LAMTOR5O43504 91 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 SP9P0CG40 484 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 KPNA1P52294 538 aaPredicted RBP13.97□□□□□ -0.17
ERBB2-220ENST00000584684 PMS1P54277 932 aaKnown RBP13.97□□□□□ -0.17
ERBB2-220ENST00000584684 PDGFRLQ15198 375 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 ANKRD40Q6AI12 368 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 ZC3H14Q6PJT7 736 aaKnown RBP13.97□□□□□ -0.17
ERBB2-220ENST00000584684 FRMD5Q7Z6J6 570 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 ACOT1Q86TX2 421 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 TTC39CQ8N584 583 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 CCDC150Q8NCX0 1101 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 FBXL13Q8NEE6 735 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 PDZD8Q8NEN9 1154 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 ERCC4Q92889 916 aaPredicted RBP13.97□□□□□ -0.17
ERBB2-220ENST00000584684 ELMO3Q96BJ8 720 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 DHTKD1Q96HY7 919 aaPredicted RBP13.97□□□□□ -0.17
ERBB2-220ENST00000584684 SLITRK1Q96PX8 696 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 SLC22A12Q96S37 553 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 CSNK1G1Q9HCP0 422 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 TRPC7Q9HCX4 862 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 HPS4Q9NQG7 708 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 KRT82Q9NSB4 513 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 SPATA6Q9NWH7 488 aaPredicted RBP13.97□□□□□ -0.17
ERBB2-220ENST00000584684 COMMD8Q9NX08 183 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 GTSE1Q9NYZ3 720 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 NDRG2Q9UN36 371 aaKnown RBP13.97□□□□□ -0.17
ERBB2-220ENST00000584684 FRYLO94915 3013 aa13.97□□□□□ -0.17
ERBB2-220ENST00000584684 PRR23AA6NEV1 266 aa13.96□□□□□ -0.17
ERBB2-220ENST00000584684 TNFRSF10BO14763 440 aa13.96□□□□□ -0.17
ERBB2-220ENST00000584684 GFRA3O60609 400 aa13.96□□□□□ -0.17
ERBB2-220ENST00000584684 CILPO75339 1184 aa13.96□□□□□ -0.17
ERBB2-220ENST00000584684 OAS1P00973 400 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms