RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 EMC10Q5UCC4 262 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 C9orf57Q5W0N0 161 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 ATL3Q6DD88 541 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 JADE1Q6IE81 842 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 THEM5Q8N1Q8 247 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 KCTD17Q8N5Z5 321 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 ARL14EPQ8N8R7 260 aaPredicted RBP10.97□□□□□ -0.65
GGA3-219ENST00000584550 CCDC26Q8TAB7 109 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 SPPL2BQ8TCT7 592 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 WHAMMQ8TF30 809 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 CRELD1Q96HD1 420 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 DRC1Q96MC2 740 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 PYM1Q9BRP8 204 aaKnown RBP10.97□□□□□ -0.65
GGA3-219ENST00000584550 ZHX3Q9H4I2 956 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 BLOC1S4Q9NUP1 217 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 TMLHEQ9NVH6 421 aa10.97□□□□□ -0.65
GGA3-219ENST00000584550 TCHHQ07283 1943 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 TRAV19A0A0A6YYK7 116 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 TULP1O00294 542 aaPredicted RBP10.96□□□□□ -0.65
GGA3-219ENST00000584550 SCAMP3O14828 347 aaKnown RBP10.96□□□□□ -0.65
GGA3-219ENST00000584550 XPOTO43592 962 aaKnown RBP10.96□□□□□ -0.65
GGA3-219ENST00000584550 TADA3O75528 432 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 NFICP08651 508 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 USP17L7P0C7H9 530 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 FTH1P19P0C7X4 201 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 MAPTP10636 758 aaKnown RBP10.96□□□□□ -0.65
GGA3-219ENST00000584550 GUCY2CP25092 1073 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 DDIT3P35638 169 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 ANP32AP39687 249 aaKnown RBP10.96□□□□□ -0.65
GGA3-219ENST00000584550 STAT6P42226 847 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 KRT85P78386 507 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 RPL6Q02878 288 aaKnown RBP10.96□□□□□ -0.65
GGA3-219ENST00000584550 MESP2Q0VG99 397 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 MAP7D1Q3KQU3 841 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 ARSHQ5FYA8 562 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 SPATA1Q5VX52 437 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 WSCD1Q658N2 575 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 LMBRD2Q68DH5 695 aaPredicted RBP10.96□□□□□ -0.65
GGA3-219ENST00000584550 SHC4Q6S5L8 630 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 CCNI2Q6ZMN8 369 aaPredicted RBP10.96□□□□□ -0.65
GGA3-219ENST00000584550 MARCH9Q86YJ5 346 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 TMEM161BQ8NDZ6 487 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 SH3RF2Q8TEC5 729 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 C2orf15Q8WU43 125 aaKnown RBP10.96□□□□□ -0.65
GGA3-219ENST00000584550 LARP4BQ92615 738 aaKnown RBP10.96□□□□□ -0.65
GGA3-219ENST00000584550 ERLEC1Q96DZ1 483 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 SPATA32Q96LK8 384 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 RPF1Q9H9Y2 349 aaKnown RBP10.96□□□□□ -0.65
GGA3-219ENST00000584550 POLMQ9NP87 494 aaPredicted RBP10.96□□□□□ -0.65
GGA3-219ENST00000584550 RCOR1Q9UKL0 485 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 PCDHA7Q9UN72 937 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 PCDHB5Q9Y5E4 795 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 ATP6V1DQ9Y5K8 247 aa10.96□□□□□ -0.65
GGA3-219ENST00000584550 MORC2Q9Y6X9 1032 aaPredicted RBP10.96□□□□□ -0.65
GGA3-219ENST00000584550 SCN1AP35498 2009 aa10.96□□□□□ -0.66
GGA3-219ENST00000584550 A0A087X0B3 334 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.95□□□□□ -0.66
GGA3-219ENST00000584550 TCRBV21S2A2A0A5A6 115 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 C2orf78A6NCI8 922 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 PIRO00625 290 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 ARHGAP33O14559 1287 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 TBCAO75347 108 aaKnown RBP10.95□□□□□ -0.66
GGA3-219ENST00000584550 FAM13AO94988 1023 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 CYP11A1P05108 521 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 SERPINF2P08697 491 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 CSH1P0DML2 217 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 CSH2P0DML3 217 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 PLS3P13797 630 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 CYP2F1P24903 491 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 NUCB2P80303 420 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 MRPS21P82921 87 aaKnown RBP10.95□□□□□ -0.66
GGA3-219ENST00000584550 ZPBP2Q6X784 338 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 CCDC73Q6ZRK6 1079 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 SV2BQ7L1I2 683 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 DYMQ7RTS9 669 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 DCP1BQ8IZD4 617 aaKnown RBP10.95□□□□□ -0.66
GGA3-219ENST00000584550 MYCT1Q8N699 235 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 IL17RCQ8NAC3 791 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 GLIS3Q8NEA6 775 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 CEP76Q8TAP6 659 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 LEO1Q8WVC0 666 aaPredicted RBP10.95□□□□□ -0.66
GGA3-219ENST00000584550 ADAMTS14Q8WXS8 1223 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 DHX58Q96C10 678 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 REEP2Q9BRK0 252 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 NTPCRQ9BSD7 190 aaKnown RBP10.95□□□□□ -0.66
GGA3-219ENST00000584550 TIPINQ9BVW5 301 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 CAPN10Q9HC96 672 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 FAM13BQ9NYF5 915 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 STK17AQ9UEE5 414 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 DSEQ9UL01 958 aa10.95□□□□□ -0.66
GGA3-219ENST00000584550 MYH11P35749 1972 aa10.94□□□□□ -0.66
GGA3-219ENST00000584550 PCDH15Q96QU1 1955 aa10.94□□□□□ -0.66
GGA3-219ENST00000584550 MYMKA6NI61 221 aa10.94□□□□□ -0.66
GGA3-219ENST00000584550 AP5Z1O43299 807 aa10.94□□□□□ -0.66
GGA3-219ENST00000584550 ADAM23O75077 832 aa10.94□□□□□ -0.66
GGA3-219ENST00000584550 NFATC1O95644 943 aa10.94□□□□□ -0.66
GGA3-219ENST00000584550 HDCP19113 662 aa10.94□□□□□ -0.66
GGA3-219ENST00000584550 LIG4P49917 911 aa10.94□□□□□ -0.66
GGA3-219ENST00000584550 SMTNP53814 917 aa10.94□□□□□ -0.66
GGA3-219ENST00000584550 ZXDBP98169 803 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms