RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 DCLK1O15075 740 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 PHACTR2O75167 634 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 RHOBTB1O94844 696 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 KCNK5O95279 499 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 CSH1P0DML2 217 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 CSH2P0DML3 217 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 DLATP10515 647 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 PPP1R2P41236 205 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 PNPLA4P41247 253 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 SHC2P98077 582 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 ELF2Q15723 593 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 SV2CQ496J9 727 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 PLK5Q496M5 336 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 FBXO43Q4G163 708 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 RNF43Q68DV7 783 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 NAIF1Q69YI7 327 aaPredicted RBP14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 TCEAL6Q6IPX3 200 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 PSAPL1Q6NUJ1 521 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 CBWD2Q8IUF1 395 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 GUF1Q8N442 669 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 STKLD1Q8NE28 680 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 RPLP0P6Q8NHW5 317 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 TCEAL3Q969E4 200 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 CCDC127Q96BQ5 260 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 TMLHEQ9NVH6 421 aa14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 DUS2Q9NX74 493 aaKnown RBP14.03□□□□□ -0.16
CDK5RAP3-234ENST00000584525 SOBPA7XYQ1 873 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TGFB1I1O43294 461 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 APBB3O95704 486 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ITGB3P05106 788 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 KRT13P13646 458 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 GJA4P35212 333 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CREB5Q02930 508 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 MYO1EQ12965 1108 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TRPC3Q13507 836 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 MTF1Q14872 753 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 NFE2Q16621 373 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 DDR2Q16832 855 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 DUOXA2Q1HG44 320 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ZNF658Q5TYW1 1059 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CRELD2Q6UXH1 353 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 C12orf56Q8IXR9 622 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CPA6Q8N4T0 437 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 RIN3Q8TB24 985 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 DUSP15Q9H1R2 295 aaPredicted RBP14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ECT2Q9H8V3 914 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 PDE11AQ9HCR9 933 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TRPC7Q9HCX4 862 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ITGA11Q9UKX5 1188 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 AGAP1Q9UPQ3 857 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 PCDHA5Q9Y5H7 936 aa14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 MAP1BP46821 2468 aaKnown RBP14.02□□□□□ -0.17
CDK5RAP3-234ENST00000584525 PSMA7O14818 248 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CAVIN2O95810 425 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 NR3C1P04150 777 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 NR2F2P24468 414 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 POLR2BP30876 1174 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 GBP1P32455 592 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 HOXD13P35453 343 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 IFNAR2P48551 515 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 RPL10AP62906 217 aaKnown RBP14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 BIRC3Q13489 604 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 DMC1Q14565 340 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ZNF268Q14587 947 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 LMBRD2Q68DH5 695 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ISM2Q6H9L7 571 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 SYT13Q7L8C5 426 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 WDR49Q8IV35 697 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 EFCAB13Q8IY85 973 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ELOA2Q8IYF1 753 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 SMYD4Q8IYR2 804 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 PDCL2Q8N4E4 241 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CSGALNACT2Q8N6G5 542 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ZSWIM2Q8NEG5 633 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 OSCP1Q8WVF1 389 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ERCC4Q92889 916 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CD101Q93033 1021 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 EDEM2Q9BV94 578 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 MTMR12Q9C0I1 747 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 UXTQ9UBK9 157 aaPredicted RBP14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 INVSQ9Y283 1065 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ANK1P16157 1881 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 USP24Q9UPU5 2620 aa14.01□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CFAP47Q6ZTR5 3102 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 TRAV19A0A0A6YYK7 116 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 C4orf47A7E2U8 309 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CETN3O15182 167 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 HUS1O60921 280 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CKMP06732 381 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 EPB41P11171 864 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ACAT1P24752 427 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CYP2F1P24903 491 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 NOVA1P51513 510 aaKnown RBP14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 DGKEP52429 567 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 RBP5P82980 135 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CYP24A1Q07973 514 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CAMK4Q16566 473 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ATP2A3Q93084 1043 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 ACDQ96AP0 544 aa14□□□□□ -0.17
CDK5RAP3-234ENST00000584525 CYP2S1Q96SQ9 504 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms