RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	UPP2	O95045	317 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	LUC7L3	O95232	432 aa	Known RBP	13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ERBB2	P04626	1255 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	GCA	P28676	217 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	KCNJ2	P63252	427 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PTPN11	Q06124	597 aa	Predicted RBP	13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PDIA2	Q13087	525 aa	Known RBP	13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	NR1H3	Q13133	447 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TTLL4	Q14679	1199 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ARMC3	Q5W041	872 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	JADE1	Q6IE81	842 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PRCC	Q92733	491 aa	Predicted RBP	13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	MAGEB18	Q96M61	343 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TSC22D3	Q99576	134 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	IFT122	Q9HBG6	1241 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ERAP1	Q9NZ08	941 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	OTOF	Q9HC10	1997 aa		13.86	□□□□□ -0.19
CSNK1D-222	ENST00000584377	FAM47DP	A6NHR8	397 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	GOLGA8M	H3BSY2	632 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ALOX15B	O15296	676 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	C22orf31	O95567	290 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ITGBL1	O95965	494 aa	Predicted RBP	13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	KDELR1	P24390	212 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PHKA2	P46019	1235 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	MKRN3	Q13064	507 aa	Known RBP	13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	BBS12	Q6ZW61	710 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	MOB2	Q70IA6	237 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TRABD2A	Q86V40	505 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TDRP	Q86YL5	185 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ANKRD13A	Q8IZ07	590 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TTC13	Q8NBP0	860 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PPP1R16B	Q96T49	567 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	C10orf88	Q9H8K7	445 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PCSK1N	Q9UHG2	260 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	AGAP1	Q9UPQ3	857 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SPDYE5	A6NIY4	337 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	EIF4E1B	A6NMX2	242 aa	Known RBP	13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CILP	O75339	1184 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CD48	P09326	243 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	GNAT1	P11488	350 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	NQO1	P15559	274 aa	Known RBP	13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CTCF	P49711	727 aa	Predicted RBP	13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	GDF10	P55107	478 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	HIF1A	Q16665	826 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CCDC142	Q17RM4	750 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ANKRD20A2	Q5SQ80	823 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ANKRD20A1	Q5TYW2	823 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ANKRD20A3	Q5VUR7	823 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SPATA21	Q7Z572	469 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PCGF5	Q86SE9	256 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TMEM176A	Q96HP8	235 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	OSBPL1A	Q9BXW6	950 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	NFKBIZ	Q9BYH8	718 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ELOVL4	Q9GZR5	314 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377		M0QYV0	167 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	MICAL2	O94851	1124 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	KRT15	P19012	456 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	IL9R	Q01113	521 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ROR2	Q01974	943 aa	Known RBP	13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	KCTD6	Q8NC69	237 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PAIP2	Q9BPZ3	127 aa	Known RBP	13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	FRMD8P1	Q9BZ68	369 aa	Predicted RBP	13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	GGT7	Q9UJ14	662 aa		13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377	FARP1	Q9Y4F1	1045 aa	Predicted RBP	13.85	□□□□□ -0.19
CSNK1D-222	ENST00000584377		A0A087WZ62	844 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SMIM24	O75264	130 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	SPAG7	O75391	227 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	MCF2	P10911	925 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	INSRR	P14616	1297 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TNFAIP2	Q03169	654 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TTLL12	Q14166	644 aa	Predicted RBP	13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	RSAD2	Q8WXG1	361 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	UBN1	Q9NPG3	1134 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	MCM3AP	O60318	1980 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ANK1	P16157	1881 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	BANF1	O75531	89 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	RNF8	O76064	485 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	MIP	P30301	263 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TAZ	Q16635	292 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	DPH6	Q7L8W6	267 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ANKMY2	Q8IV38	441 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	PPIL6	Q8IXY8	311 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CXorf38	Q8TB03	319 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	HSPH1	Q92598	858 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	MRRF	Q96E11	262 aa	Known RBP	13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	CPB2	Q96IY4	423 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	TRABD	Q9H4I3	376 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	MROH8	Q9H579	483 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	KCNH4	Q9UQ05	1017 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	ARL2BP	Q9Y2Y0	163 aa		13.84	□□□□□ -0.19
CSNK1D-222	ENST00000584377	DPPA5	A6NC42	116 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	P4HA1	P13674	534 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ATIC	P31939	592 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	WDR4	P57081	412 aa	Known RBP	13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PKN2	Q16513	984 aa	Known RBP	13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	AMHR2	Q16671	573 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	FAM187B	Q17R55	369 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ZNF484	Q5JVG2	852 aa		13.83	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RFX6	Q8HWS3	928 aa		13.83	□□□□□ -0.2

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