RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877		K7EQS6	105 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	EIF5B	O60841	1220 aa	Known RBP	9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	FAM13A	O94988	1023 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	NFATC1	O95644	943 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	CYP2F1	P24903	491 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	PNPLA4	P41247	253 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	DHPS	P49366	369 aa	Predicted RBP	9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	DDR2	Q16832	855 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	UAP1L1	Q3KQV9	507 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	C2orf27A	Q580R0	203 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	RILPL1	Q5EBL4	403 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	SDHAF4	Q5VUM1	108 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	ARL6IP4	Q66PJ3	421 aa	Known RBP	9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	SLFN12L	Q6IEE8	588 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	ANO7	Q6IWH7	933 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	LRSAM1	Q6UWE0	723 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	PACS2	Q86VP3	889 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	GPBP1	Q86WP2	473 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	EFCAB13	Q8IY85	973 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	FSIP1	Q8NA03	581 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	DEFB124	Q8NES8	71 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	MDGA1	Q8NFP4	955 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	OLIG1	Q8TAK6	271 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	PIGK	Q92643	395 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	TATDN2	Q93075	761 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	ZSCAN31	Q96LW9	406 aa	Predicted RBP	9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	FIZ1	Q96SL8	496 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	NUSAP1	Q9BXS6	441 aa	Known RBP	9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	SLC32A1	Q9H598	525 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	GCNT4	Q9P109	453 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	AGO2	Q9UKV8	859 aa	Known RBP	9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	STYXL1	Q9Y6J8	313 aa		9.38	□□□□□ -0.91
NUP85-223	ENST00000583877	UPK3BL1	B0FP48	263 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	ANKRD63	C9JTQ0	380 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	UPK3BL2	E5RIL1	263 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	C3orf80	F5H4A9	247 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	TNFRSF10B	O14763	440 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	ALDH1A2	O94788	518 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	IL18RAP	O95256	599 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	OPRD1	P41143	372 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	P2RY2	P41231	377 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	DPP6	P42658	865 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	PDE6C	P51160	858 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	SEC13	P55735	322 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	MRPS21	P82921	87 aa	Known RBP	9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	MYL7	Q01449	175 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	KCNB1	Q14721	858 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	CRY1	Q16526	586 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	CFAP221	Q4G0U5	840 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	TRIM61	Q5EBN2	209 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	INTS6L	Q5JSJ4	861 aa	Known RBP	9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	SPDYC	Q5MJ68	293 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	CRELD2	Q6UXH1	353 aa	Predicted RBP	9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	LPCAT2	Q7L5N7	544 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	TMEM86A	Q8N2M4	240 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	PDCL2	Q8N4E4	241 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	KIAA1958	Q8N8K9	716 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	ARL14EP	Q8N8R7	260 aa	Predicted RBP	9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	SPATA18	Q8TC71	538 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	SH3RF2	Q8TEC5	729 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	CALML4	Q96GE6	196 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	FUBP3	Q96I24	572 aa	Known RBP eCLIP	9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	SPACA7	Q96KW9	195 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	AK8	Q96MA6	479 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	PKMYT1	Q99640	499 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	LINC00597	Q9H2U6	94 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	ST6GALNAC4	Q9H4F1	302 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	DDX43	Q9NXZ2	648 aa	Known RBP	9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	GTF3C4	Q9UKN8	822 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	ARHGAP26	Q9UNA1	814 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	MSRB2	Q9Y3D2	182 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	KNTC1	P50748	2209 aa		9.37	□□□□□ -0.91
NUP85-223	ENST00000583877	URB1	O60287	2271 aa	Known RBP	9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	TMEM131	Q92545	1883 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	C2orf78	A6NCI8	922 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	TISP43	B9A030	160 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	HYAL3	O43820	417 aa	Predicted RBP	9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	KALRN	O60229	2985 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	HUS1	O60921	280 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	TBCA	O75347	108 aa	Known RBP	9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	KRT18	P05783	430 aa	Known RBP	9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	ENG	P17813	658 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	PFKL	P17858	780 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	HDC	P19113	662 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	ACAT1	P24752	427 aa	Known RBP	9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	RING1	Q06587	406 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	SEMA3B	Q13214	749 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	BYSL	Q13895	437 aa	Known RBP	9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	DHX8	Q14562	1220 aa	Known RBP	9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	POSTN	Q15063	836 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	GAB4	Q2WGN9	574 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	HSF5	Q4G112	596 aa	Predicted RBP	9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	PEAR1	Q5VY43	1037 aa	Predicted RBP	9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	LMBRD2	Q68DH5	695 aa	Predicted RBP	9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	KIAA1211L	Q6NV74	962 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	SLC23A3	Q6PIS1	610 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	PIP4P1	Q86T03	277 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	SYT12	Q8IV01	421 aa		9.36	□□□□□ -0.91
NUP85-223	ENST00000583877	CCDC33	Q8N5R6	958 aa		9.36	□□□□□ -0.91

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