RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 BIRC3Q13489 604 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 PSMD6Q15008 389 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 WDR72Q3MJ13 1102 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 FOXD4L6Q3SYB3 417 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 MDH1BQ5I0G3 518 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SCARA3Q6AZY7 606 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 IL31Q6EBC2 164 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SHC4Q6S5L8 630 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 FOXD4L3Q6VB84 417 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CACNA2D4Q7Z3S7 1137 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CEP57L1Q8IYX8 460 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CAMKK1Q8N5S9 505 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CCDC26Q8TAB7 109 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 MYCBPAPQ8TBZ2 947 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 ZNF507Q8TCN5 953 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SYAP1Q96A49 352 aaPredicted RBP9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CHFRQ96EP1 664 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SPATA17Q96L03 361 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SLITRK1Q96PX8 696 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SLC22A12Q96S37 553 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 BLZF1Q9H2G9 400 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CGNQ9P2M7 1197 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 TFIP11Q9UBB9 837 aaKnown RBP9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 ARHGAP26Q9UNA1 814 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 EML5Q05BV3 1969 aa9.29□□□□□ -0.92
CDK5RAP3-229ENST00000583697 DCDC2BA2VCK2 349 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 A8MXQ7 604 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 F8VP50 259 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SLC30A4O14863 429 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 AXIN1O15169 862 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 POLR2DO15514 142 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 EXOC3O60645 756 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 TACC1O75410 805 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 EPN2O95208 641 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 APBB3O95704 486 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 F13A1P00488 732 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 TCF3P15923 654 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 TRIM21P19474 475 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 PPP3CCP48454 512 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 GALK1P51570 392 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 NOP14P78316 857 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 DMC1Q14565 340 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 ELF2Q15723 593 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 ZNF699Q32M78 642 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 EML3Q32P44 896 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 TDRD10Q5VZ19 366 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CNNM4Q6P4Q7 775 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 EPM2AIP1Q7L775 607 aaPredicted RBP9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SYT13Q7L8C5 426 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 PDZD8Q8NEN9 1154 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 GOLGA5Q8TBA6 731 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SCFD1Q8WVM8 642 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 DDX1Q92499 740 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 LOXL4Q96JB6 756 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 CYP2S1Q96SQ9 504 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 C7orf25Q9BPX7 421 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 MRPL45Q9BRJ2 306 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 ARRDC1-AS1Q9H2J1 176 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 SLC39A2Q9NP94 309 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 GCNT4Q9P109 453 aa9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 NXF1Q9UBU9 619 aaKnown RBP9.28□□□□□ -0.92
CDK5RAP3-229ENST00000583697 RALGAPA1Q6GYQ0 2036 aa9.27□□□□□ -0.92
CDK5RAP3-229ENST00000583697 LEFTY2O00292 366 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TGFB1I1O43294 461 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 STAU1O95793 577 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CST3P01034 146 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 MBL2P11226 248 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CASP1P29466 404 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 HOXC13P31276 330 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ATICP31939 592 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 GBP1P32455 592 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 HOXD13P35453 343 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 GNL1P36915 607 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 MPLP40238 635 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 AFMP43652 599 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 USP46P62068 366 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PKP1Q13835 747 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 BMT2Q1RMZ1 405 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ZNF667Q5HYK9 610 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PPM1JQ5JR12 505 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 NAIF1Q69YI7 327 aaPredicted RBP9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ATL3Q6DD88 541 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SCARA5Q6ZMJ2 495 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 DDX42Q86XP3 938 aaKnown RBP eCLIP9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 C12orf56Q8IXR9 622 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 B3GALNT2Q8NCR0 500 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TSTD1Q8NFU3 115 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 C8orf48Q96LL4 319 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 MED10Q9BTT4 135 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 TTLL2Q9BWV7 592 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 ZNF518BQ9C0D4 1074 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 DPEP3Q9H4B8 488 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 FBRSL1Q9HCM7 1045 aaKnown RBP9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 EXOC1Q9NV70 894 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 SMPD4Q9NXE4 827 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CFAP45Q9UL16 551 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 PCDHGA5Q9Y5G8 931 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 CPQQ9Y646 472 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 GVINP1Q7Z2Y8 2422 aa9.27□□□□□ -0.93
CDK5RAP3-229ENST00000583697 OTOGLQ3ZCN5 2332 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms