RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, human

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC3-208	ENST00000583649	LARP1B	Q659C4	914 aa	Known RBP	11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	TAS1R3	Q7RTX0	852 aa		11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	GPR155	Q7Z3F1	870 aa		11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	FILIP1	Q7Z7B0	1213 aa		11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	DIS3L2	Q8IYB7	885 aa	Known RBP	11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	ADGRG2	Q8IZP9	1017 aa		11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	ZNF513	Q8N8E2	541 aa	Predicted RBP	11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	TNFRSF25	Q93038	417 aa		11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	CEP295NL	Q96MC4	621 aa		11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	ZNF560	Q96MR9	790 aa		11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	PRDM16	Q9HAZ2	1276 aa		11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	TM7SF3	Q9NS93	570 aa		11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	GJB4	Q9NTQ9	266 aa		11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	PDRG1	Q9NUG6	133 aa		11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	DDX19A	Q9NUU7	478 aa	Known RBP	11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	TRPM5	Q9NZQ8	1165 aa		11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	LARS	Q9P2J5	1176 aa	Known RBP	11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	LRWD1	Q9UFC0	647 aa		11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	PCDHB6	Q9Y5E3	794 aa		11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	ZNF638	Q14966	1978 aa	Known RBP	11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	ACACA	Q13085	2346 aa		11.95	□□□□□ -0.5
CASC3-208	ENST00000583649	GOLGA8CP	A6NN73	597 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	BTBD18	B2RXH4	712 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	LEFTY2	O00292	366 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	HNRNPDL	O14979	420 aa	Known RBP	11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	OGT	O15294	1046 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	ARHGAP6	O43182	974 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	TNFSF14	O43557	240 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	CYP17A1	P05093	508 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	ADH5	P11766	374 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	PLS3	P13797	630 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	NTSR1	P30989	418 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	KIR2DL1	P43626	348 aa	Predicted RBP	11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	ATP2C1	P98194	919 aa	Predicted RBP	11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	GAD2	Q05329	585 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	DDR2	Q16832	855 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	TAF1B	Q53T94	588 aa	Predicted RBP	11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	KRT79	Q5XKE5	535 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	WSCD1	Q658N2	575 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	JADE1	Q6IE81	842 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	LRRTM3	Q86VH5	581 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	TMPRSS12	Q86WS5	348 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	SPATA2L	Q8IUW3	424 aa	Predicted RBP	11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	ACBD6	Q9BR61	282 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	TMEM60	Q9H2L4	133 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	PRORY	Q9H606	182 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	ASB7	Q9H672	318 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	GAREM1	Q9H706	876 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	GCNT4	Q9P109	453 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	DEC1	Q9P2X7	70 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	CYP8B1	Q9UNU6	501 aa		11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	URB1	O60287	2271 aa	Known RBP	11.94	□□□□□ -0.5
CASC3-208	ENST00000583649	KPNA7	A9QM74	516 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	EPB41L2	O43491	1005 aa	Known RBP	11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	ADAM23	O75077	832 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	MAPT	P10636	758 aa	Known RBP	11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	GABRG2	P18507	467 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	ANXA13	P27216	316 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	GUCY2F	P51841	1108 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	CDR1	P51861	262 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	KDSR	Q06136	332 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	PDIA5	Q14554	519 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	ANKRD1	Q15327	319 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	ENOX2	Q16206	610 aa	Known RBP	11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	C4orf50	Q6ZRC1	276 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	SLC41A1	Q8IVJ1	513 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	SCN4B	Q8IWT1	228 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	CHPF	Q8IZ52	775 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	TMEM161B	Q8NDZ6	487 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	SNX29	Q8TEQ0	813 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	OTUB2	Q96DC9	234 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	FUBP3	Q96I24	572 aa	Known RBP eCLIP	11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	SLC22A12	Q96S37	553 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	LARP6	Q9BRS8	491 aa	Known RBP	11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	MSTO1	Q9BUK6	570 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	TM6SF1	Q9BZW5	370 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	CCSER1	Q9C0I3	900 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	MIR1-1HG	Q9H1L0	117 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	KCND2	Q9NZV8	630 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	C2CD2	Q9Y426	696 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	AK5	Q9Y6K8	562 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	PI4KA	P42356	2102 aa		11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.93	□□□□□ -0.5
CASC3-208	ENST00000583649	ANO9	A1A5B4	782 aa		11.92	□□□□□ -0.5
CASC3-208	ENST00000583649	C2orf78	A6NCI8	922 aa		11.92	□□□□□ -0.5
CASC3-208	ENST00000583649	ERVH48-1	M5A8F1	160 aa		11.92	□□□□□ -0.5
CASC3-208	ENST00000583649	BCAT2	O15382	392 aa	Predicted RBP	11.92	□□□□□ -0.5
CASC3-208	ENST00000583649	HUS1	O60921	280 aa		11.92	□□□□□ -0.5
CASC3-208	ENST00000583649	CILP	O75339	1184 aa		11.92	□□□□□ -0.5
CASC3-208	ENST00000583649	TADA3	O75528	432 aa		11.92	□□□□□ -0.5
CASC3-208	ENST00000583649	ADRB2	P07550	413 aa		11.92	□□□□□ -0.5
CASC3-208	ENST00000583649	ATXN1L	P0C7T5	689 aa	Known RBP	11.92	□□□□□ -0.5
CASC3-208	ENST00000583649	GUCY2C	P25092	1073 aa		11.92	□□□□□ -0.5
CASC3-208	ENST00000583649	PCSK1	P29120	753 aa		11.92	□□□□□ -0.5
CASC3-208	ENST00000583649	CD6	P30203	668 aa		11.92	□□□□□ -0.5
CASC3-208	ENST00000583649	EIF2S3	P41091	472 aa	Known RBP	11.92	□□□□□ -0.5
CASC3-208	ENST00000583649	TNFSF9	P41273	254 aa		11.92	□□□□□ -0.5
CASC3-208	ENST00000583649	GRK6	P43250	576 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms