RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 RHDQ02161 417 aa4.44□□□□□ -1.7
VAPA-206ENST00000583475 SEMA5AQ13591 1074 aa4.44□□□□□ -1.7
VAPA-206ENST00000583475 POLD3Q15054 466 aaPredicted RBP4.44□□□□□ -1.7
VAPA-206ENST00000583475 LY6KQ17RY6 165 aa4.44□□□□□ -1.7
VAPA-206ENST00000583475 DEPDC1Q5TB30 811 aa4.44□□□□□ -1.7
VAPA-206ENST00000583475 WDR53Q7Z5U6 358 aaPredicted RBP4.44□□□□□ -1.7
VAPA-206ENST00000583475 SESTD1Q86VW0 696 aa4.44□□□□□ -1.7
VAPA-206ENST00000583475 SLC15A3Q8IY34 581 aa4.44□□□□□ -1.7
VAPA-206ENST00000583475 R3HDM4Q96D70 268 aa4.44□□□□□ -1.7
VAPA-206ENST00000583475 LRRC27Q9C0I9 530 aa4.44□□□□□ -1.7
VAPA-206ENST00000583475 GBA2Q9HCG7 927 aaPredicted RBP4.44□□□□□ -1.7
VAPA-206ENST00000583475 DUSP22Q9NRW4 184 aa4.44□□□□□ -1.7
VAPA-206ENST00000583475 ZSCAN32Q9NX65 697 aa4.44□□□□□ -1.7
VAPA-206ENST00000583475 SNX14Q9Y5W7 946 aa4.44□□□□□ -1.7
VAPA-206ENST00000583475 WNT6Q9Y6F9 365 aa4.44□□□□□ -1.7
VAPA-206ENST00000583475 TARM1B6A8C7 271 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 ZNF37AP17032 561 aaPredicted RBP4.43□□□□□ -1.7
VAPA-206ENST00000583475 PEX2P28328 305 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 PDE1AP54750 535 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 RPS16P62249 146 aaKnown RBP4.43□□□□□ -1.7
VAPA-206ENST00000583475 TFF2Q03403 129 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 NPY5RQ15761 445 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 SLC44A4Q53GD3 710 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 AARS2Q5JTZ9 985 aaKnown RBP4.43□□□□□ -1.7
VAPA-206ENST00000583475 PARS2Q7L3T8 475 aaKnown RBP4.43□□□□□ -1.7
VAPA-206ENST00000583475 IZUMO1Q8IYV9 350 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 TMEM171Q8WVE6 324 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 OSCP1Q8WVF1 389 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 SOCS4Q8WXH5 440 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 SPSB4Q96A44 273 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 TIFAQ96CG3 184 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 REPS1Q96D71 796 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 ZNF287Q9HBT7 754 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 AFF4Q9UHB7 1163 aaKnown RBP4.43□□□□□ -1.7
VAPA-206ENST00000583475 PADI4Q9UM07 663 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 GABRQQ9UN88 632 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 PAXBP1Q9Y5B6 917 aa4.43□□□□□ -1.7
VAPA-206ENST00000583475 MBD3L4A6NDZ8 208 aaPredicted RBP4.42□□□□□ -1.7
VAPA-206ENST00000583475 MBD3L3A6NE82 208 aaPredicted RBP4.42□□□□□ -1.7
VAPA-206ENST00000583475 WIPF3A6NGB9 483 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 TJP3O95049 919 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 VNN1O95497 513 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 MAP4K4O95819 1239 aaPredicted RBP4.42□□□□□ -1.7
VAPA-206ENST00000583475 ENGP17813 658 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 PRKAG1P54619 331 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 EEFSECP57772 596 aaKnown RBP4.42□□□□□ -1.7
VAPA-206ENST00000583475 PCID2Q5JVF3 399 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 SLC9A4Q6AI14 798 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 FCRLBQ6BAA4 426 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 CEP85Q6P2H3 762 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 KCTD20Q7Z5Y7 419 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 DGKHQ86XP1 1220 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 LRRC71Q8N4P6 559 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 RP9Q8TA86 221 aaKnown RBP4.42□□□□□ -1.7
VAPA-206ENST00000583475 XAGE5Q8WWM1 108 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 TBC1D5Q92609 795 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 DPF1Q92782 380 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 VOPP1Q96AW1 172 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 C17orf80Q9BSJ5 609 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 FSD1LQ9BXM9 530 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 TRIM5Q9C035 493 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 CHST8Q9H2A9 424 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 DDX21Q9NR30 783 aaKnown RBP eCLIP4.42□□□□□ -1.7
VAPA-206ENST00000583475 TRMT13Q9NUP7 481 aaKnown RBP4.42□□□□□ -1.7
VAPA-206ENST00000583475 CHPF2Q9P2E5 772 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 DNMT3BQ9UBC3 853 aaKnown RBP4.42□□□□□ -1.7
VAPA-206ENST00000583475 RGS17Q9UGC6 210 aaPredicted RBP4.42□□□□□ -1.7
VAPA-206ENST00000583475 SERGEFQ9UGK8 458 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 OGDHLQ9ULD0 1010 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 CDY1Q9Y6F8 540 aa4.42□□□□□ -1.7
VAPA-206ENST00000583475 LOC102723971A0A1B0GUV8 181 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 H7C4K7 107 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 QSOX1O00391 747 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 MGEA5O60502 916 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 JTBO76095 146 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 IL1R1P14778 569 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 KLRC1P26715 233 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 MRPS21P82921 87 aaKnown RBP4.41□□□□□ -1.7
VAPA-206ENST00000583475 CCNIQ14094 377 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 INSCQ1MX18 579 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 Q6ZWC4 215 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 CAND1Q86VP6 1230 aaKnown RBP4.41□□□□□ -1.7
VAPA-206ENST00000583475 FANCBQ8NB91 859 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 RSPRY1Q96DX4 576 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 MSLNLQ96KJ4 702 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 LENG8Q96PV6 779 aaPredicted RBP4.41□□□□□ -1.7
VAPA-206ENST00000583475 PPP1R9BQ96SB3 815 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 THAP7Q9BT49 309 aaPredicted RBP4.41□□□□□ -1.7
VAPA-206ENST00000583475 STK31Q9BXU1 1019 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 ADARB2Q9NS39 739 aaKnown RBP4.41□□□□□ -1.7
VAPA-206ENST00000583475 FRMD4BQ9Y2L6 1034 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 PCDHGB6Q9Y5F9 930 aa4.41□□□□□ -1.7
VAPA-206ENST00000583475 MANSC4A6NHS7 340 aaPredicted RBP4.4□□□□□ -1.71
VAPA-206ENST00000583475 F8W8V4 182 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 CCP110O43303 1012 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 RASSF9O75901 435 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 NHLRC4P0CG21 123 aaPredicted RBP4.4□□□□□ -1.71
VAPA-206ENST00000583475 BTF3P20290 206 aaKnown RBP4.4□□□□□ -1.71
VAPA-206ENST00000583475 CTGFP29279 349 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 BCAT1P54687 386 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms