RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 TIGD7Q6NT04 549 aaPredicted RBP6.1□□□□□ -1.43
RTTN-209ENST00000583043 SLC27A1Q6PCB7 646 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 C7orf31Q8N865 590 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 JADE3Q92613 823 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 OLFM3Q96PB7 478 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 MANSC1Q9H8J5 431 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 NDUFA13Q9P0J0 144 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 ITGB4P16144 1822 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 C3orf70A6NLC5 250 aaPredicted RBP6.1□□□□□ -1.43
RTTN-209ENST00000583043 SMIM22K7EJ46 135 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 CHEK2O96017 543 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 STAG3L1P0CL83 205 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 ACADSP16219 412 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 KCNA2P16389 499 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 HSPA13P48723 471 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 PTK7Q13308 1070 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 TTMPQ5BVD1 217 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 DAB2IPQ5VWQ8 1189 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 ZNF449Q6P9G9 518 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 LBX2Q6XYB7 198 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 KYAT3Q6YP21 454 aaKnown RBP6.1□□□□□ -1.43
RTTN-209ENST00000583043 TSHZ1Q6ZSZ6 1077 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 TBC1D1Q86TI0 1168 aaPredicted RBP6.1□□□□□ -1.43
RTTN-209ENST00000583043 OTUD5Q96G74 571 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 BORCS6Q96GS4 357 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 HAUS8Q9BT25 410 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 AAR2Q9Y312 384 aaKnown RBP6.1□□□□□ -1.43
RTTN-209ENST00000583043 TOGARAM1Q9Y4F4 1720 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 TMEM191CA6NGB0 347 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 SDR42E2A6NKP2 422 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 PRPF4O43172 522 aaKnown RBP eCLIP6.1□□□□□ -1.43
RTTN-209ENST00000583043 SPAG7O75391 227 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 CYP3A5P20815 502 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 UBA1P22314 1058 aaKnown RBP6.1□□□□□ -1.43
RTTN-209ENST00000583043 MMP8P22894 467 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 KPNA1P52294 538 aaPredicted RBP6.1□□□□□ -1.43
RTTN-209ENST00000583043 ANO5Q75V66 913 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 DDX42Q86XP3 938 aaKnown RBP eCLIP6.1□□□□□ -1.43
RTTN-209ENST00000583043 RIN2Q8WYP3 895 aaPredicted RBP6.1□□□□□ -1.43
RTTN-209ENST00000583043 PRKD2Q9BZL6 878 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 ABHD16BQ9H3Z7 469 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 RABEP2Q9H5N1 569 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 NINJ2Q9NZG7 142 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 ZFATQ9P243 1243 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 TBK1Q9UHD2 729 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 ANKRD6Q9Y2G4 727 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 STK38LQ9Y2H1 464 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 TCHHQ07283 1943 aa6.1□□□□□ -1.43
RTTN-209ENST00000583043 ZC3H4Q9UPT8 1303 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 KIF3CO14782 793 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 LIASO43766 372 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 HSPA4LO95757 839 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 APOEP02649 317 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 GRM5P41594 1212 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 NPY2RP49146 381 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 CTCFP49711 727 aaPredicted RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 IRX1P78414 480 aaPredicted RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 STX3Q13277 289 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 MTFR1Q15390 333 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 FAM133BQ5BKY9 247 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 SMIM5Q71RC9 77 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 ARCQ7LC44 396 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 ZNF467Q7Z7K2 595 aaPredicted RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 PPM1NQ8N819 430 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 TSEN2Q8NCE0 465 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 GFM2Q969S9 779 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 NSL1Q96IY1 281 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 ZFP91Q96JP5 570 aaPredicted RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 SLITRK1Q96PX8 696 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 ACO2Q99798 780 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 DHX35Q9H5Z1 703 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 GINS2Q9Y248 185 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 MROH7Q68CQ1 1323 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 NAV1Q8NEY1 1877 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 ANKRD63C9JTQ0 380 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 TULP2O00295 520 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 CALB2P22676 271 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 MRPS35P82673 323 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 FAM187BQ17R55 369 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 C3orf62Q6ZUJ4 267 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 PLEKHH3Q7Z736 793 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 LRRC34Q8IZ02 419 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 MCUQ8NE86 351 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 GSDMBQ8TAX9 411 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 TFB1MQ8WVM0 346 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 KLRG1Q96E93 195 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 CDK5RAP1Q96SZ6 601 aaKnown RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 STRA6Q9BX79 667 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 SLC40A1Q9NP59 571 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 GPRC5CQ9NQ84 441 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 USP18Q9UMW8 372 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 ARHGAP42A6NI28 874 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 SPDYE16A6NNV3 312 aaPredicted RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 BIRC5O15392 142 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 S100BP04271 92 aaPredicted RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 ITGA4P13612 1032 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 GNL1P36915 607 aaPredicted RBP6.09□□□□□ -1.43
RTTN-209ENST00000583043 SCTRP47872 440 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 GEMP55040 296 aa6.09□□□□□ -1.43
RTTN-209ENST00000583043 AUHQ13825 339 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms