RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 USP9XQ93008 2570 aaPredicted RBP7.95□□□□□ -1.14
NF1-222ENST00000582892 SERTM1A2A2V5 107 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 TARSL2A2RTX5 802 aaKnown RBP7.95□□□□□ -1.14
NF1-222ENST00000582892 TRIM49BA6NDI0 452 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 TMEM8BA6NDV4 472 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 C4orf47A7E2U8 309 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 FAM86B1E9PN63 330 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 MEIS1O00470 390 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 MAP2K7O14733 419 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 TBX3O15119 743 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 MAFGO15525 162 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 EPN2O95208 641 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 LCA5LO95447 670 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 GNA14O95837 355 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 PRB1P04280 392 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 ALDH2P05091 517 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 C8AP07357 584 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 FAM86B2P0C5J1 330 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 CHRNB1P11230 501 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 CEBPBP17676 345 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 TRIM21P19474 475 aaKnown RBP7.95□□□□□ -1.14
NF1-222ENST00000582892 MSX1P28360 303 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 GMPRP36959 345 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 SOX9P48436 509 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 CCR3P51677 355 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 USP11P51784 963 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 EPHA4P54764 986 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 MARSP56192 900 aaKnown RBP7.95□□□□□ -1.14
NF1-222ENST00000582892 CKAP4Q07065 602 aaKnown RBP7.95□□□□□ -1.14
NF1-222ENST00000582892 STK4Q13043 487 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 AP3B2Q13367 1082 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 MAN2A1Q16706 1144 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 CEP55Q53EZ4 464 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 MIIPQ5JXC2 388 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 RTP2Q5QGT7 225 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 UBXN11Q5T124 520 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 RNF43Q68DV7 783 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 ANKRD40Q6AI12 368 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 WDR93Q6P2C0 686 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 WDR59Q6PJI9 974 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 FAM43BQ6ZT52 329 aaPredicted RBP7.95□□□□□ -1.14
NF1-222ENST00000582892 TRAPPC11Q7Z392 1133 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 LONP2Q86WA8 852 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 COLGALT2Q8IYK4 626 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 KIAA0895Q8NCT3 520 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 ACRBPQ8NEB7 543 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 LRRC15Q8TF66 581 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 HDAC7Q8WUI4 952 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 SYN2Q92777 582 aaPredicted RBP7.95□□□□□ -1.14
NF1-222ENST00000582892 ZNF837Q96EG3 531 aaPredicted RBP7.95□□□□□ -1.14
NF1-222ENST00000582892 CEP63Q96MT8 703 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 PNMA5Q96PV4 448 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 NELL2Q99435 816 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 TSG101Q99816 390 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 ARID3AQ99856 593 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 TMEM175Q9BSA9 504 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 RSAD1Q9HA92 442 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 GPAMQ9HCL2 828 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 DNMT3BQ9UBC3 853 aaKnown RBP7.95□□□□□ -1.14
NF1-222ENST00000582892 MYO6Q9UM54 1294 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 ZNF232Q9UNY5 417 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 REXO2Q9Y3B8 237 aaKnown RBP7.95□□□□□ -1.14
NF1-222ENST00000582892 GPC6Q9Y625 555 aaPredicted RBP7.95□□□□□ -1.14
NF1-222ENST00000582892 ZFP37Q9Y6Q3 630 aaPredicted RBP7.95□□□□□ -1.14
NF1-222ENST00000582892 SPTA1P02549 2419 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 ADAMTS9Q9P2N4 1935 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 SHROOM3Q8TF72 1996 aa7.95□□□□□ -1.14
NF1-222ENST00000582892 ATMQ13315 3056 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 THADAQ6YHU6 1953 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 SFI1A8K8P3 1242 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 RNF225M0QZC1 329 aaPredicted RBP7.94□□□□□ -1.14
NF1-222ENST00000582892 EDIL3O43854 480 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 ZNF623O75123 536 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 PRLRP16471 622 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 NOS2P35228 1153 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 TXKP42681 527 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 MTIF2P46199 727 aaKnown RBP7.94□□□□□ -1.14
NF1-222ENST00000582892 RAP1GAPP47736 663 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 SCNN1GP51170 649 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 VAV2P52735 878 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 PRKCEQ02156 737 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 GPS2Q13227 327 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 ELOAQ14241 798 aaKnown RBP7.94□□□□□ -1.14
NF1-222ENST00000582892 VWA3BQ502W6 1294 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 IQCEQ6IPM2 695 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 MIS18BP1Q6P0N0 1132 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 FUT10Q6P4F1 479 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 PKN3Q6P5Z2 889 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 CATSPER4Q7RTX7 472 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 ZNF572Q7Z3I7 529 aaPredicted RBP7.94□□□□□ -1.14
NF1-222ENST00000582892 ZC3H3Q8IXZ2 948 aaKnown RBP7.94□□□□□ -1.14
NF1-222ENST00000582892 SLFN12Q8IYM2 578 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 SLC7A14Q8TBB6 771 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 URGCPQ8TCY9 931 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 HASPINQ8TF76 798 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 TCEAL4Q96EI5 215 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 FAM193BQ96PV7 902 aaPredicted RBP7.94□□□□□ -1.14
NF1-222ENST00000582892 CLSTN3Q9BQT9 956 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 PAAF1Q9BRP4 392 aa7.94□□□□□ -1.14
NF1-222ENST00000582892 EDEM2Q9BV94 578 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms