RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 GCNT3O95395 438 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 KRT19P08727 400 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 CEACAM1P13688 526 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 PFKLP17858 780 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 CSRP1P21291 193 aaKnown RBP14.51□□□□□ -0.09
SS18-222ENST00000582792 BCKDHBP21953 392 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 ZXDBP98169 803 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 FOXC1Q12948 553 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 CRY1Q16526 586 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 GAB4Q2WGN9 574 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 C2orf27AQ580R0 203 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 ATL3Q6DD88 541 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 ANO7Q6IWH7 933 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 VSTM1Q6UX27 236 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 C4orf50Q6ZRC1 276 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 USP49Q70CQ1 688 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 DPH6Q7L8W6 267 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 LIMS2Q7Z4I7 341 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 MDGA1Q8NFP4 955 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 DNAJC19Q96DA6 116 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 CEP295NLQ96MC4 621 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 OLFML3Q9NRN5 406 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 TBC1D7Q9P0N9 293 aa14.51□□□□□ -0.09
SS18-222ENST00000582792 DSPP15924 2871 aaKnown RBP14.5□□□□□ -0.09
SS18-222ENST00000582792 GOLGA8IPA6NC78 632 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 ANTXRLA6NF34 631 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 MYMKA6NI61 221 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 GOLGA8JA6NMD2 632 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 PATE3B3GLJ2 98 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 ATP2C2O75185 946 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 F13A1P00488 732 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 TMEM191BP0C7N4 346 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 CASP5P51878 434 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 NUCB2P80303 420 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 KIAA1958Q8N8K9 716 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 KDF1Q8NAX2 398 aaPredicted RBP14.5□□□□□ -0.09
SS18-222ENST00000582792 OLIG1Q8TAK6 271 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 KBTBD7Q8WVZ9 684 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 SYT15Q9BQS2 421 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 CBWD1Q9BRT8 395 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 TMEM121BQ9BXQ6 578 aaPredicted RBP14.5□□□□□ -0.09
SS18-222ENST00000582792 MTMR12Q9C0I1 747 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 PDE11AQ9HCR9 933 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 MAGEC2Q9UBF1 373 aaPredicted RBP14.5□□□□□ -0.09
SS18-222ENST00000582792 CCDC39Q9UFE4 941 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 CDH9Q9ULB4 789 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 ZMIZ1Q9ULJ6 1067 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 PCDHB13Q9Y5F0 798 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 PTPRDP23468 1912 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 NBEAQ8NFP9 2946 aa14.5□□□□□ -0.09
SS18-222ENST00000582792 LEFTY2O00292 366 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 CYP17A1P05093 508 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 BDNFP23560 247 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 LMO2P25791 158 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 DHPSP49366 369 aaPredicted RBP14.49□□□□□ -0.09
SS18-222ENST00000582792 USP46P62068 366 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 PSMC1P62191 440 aaKnown RBP14.49□□□□□ -0.09
SS18-222ENST00000582792 IRX4P78413 519 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 MRPS21P82921 87 aaKnown RBP14.49□□□□□ -0.09
SS18-222ENST00000582792 MYO1EQ12965 1108 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 ALCAMQ13740 583 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 MAPRE1Q15691 268 aaKnown RBP14.49□□□□□ -0.09
SS18-222ENST00000582792 TMEM92Q6UXU6 159 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 DENND5BQ6ZUT9 1274 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 SV2BQ7L1I2 683 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 FILIP1Q7Z7B0 1213 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 SYCP3Q8IZU3 236 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 CCDC33Q8N5R6 958 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 MYLPFQ96A32 169 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 ANKRD36BP1Q96IX9 119 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 ZNF396Q96N95 335 aaPredicted RBP14.49□□□□□ -0.09
SS18-222ENST00000582792 TTLL2Q9BWV7 592 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 ADAM33Q9BZ11 813 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 CRTAC1Q9NQ79 661 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 TRPM5Q9NZQ8 1165 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 EVLQ9UI08 416 aaPredicted RBP14.49□□□□□ -0.09
SS18-222ENST00000582792 CIZ1Q9ULV3 898 aaPredicted RBP14.49□□□□□ -0.09
SS18-222ENST00000582792 R3HCC1Q9Y3T6 440 aaKnown RBP14.49□□□□□ -0.09
SS18-222ENST00000582792 ZFYVE26Q68DK2 2539 aa14.49□□□□□ -0.09
SS18-222ENST00000582792 ATRXP46100 2492 aa14.48□□□□□ -0.09
SS18-222ENST00000582792 ALDH1A2O94788 518 aa14.48□□□□□ -0.09
SS18-222ENST00000582792 OLFM2O95897 454 aa14.48□□□□□ -0.09
SS18-222ENST00000582792 CHRM1P11229 460 aaPredicted RBP14.48□□□□□ -0.09
SS18-222ENST00000582792 HNRNPLP14866 589 aaKnown RBP eCLIP14.48□□□□□ -0.091e-9■■■■■ 30.1
SS18-222ENST00000582792 SPINK2P20155 84 aa14.48□□□□□ -0.09
SS18-222ENST00000582792 GRIK1P39086 918 aa14.48□□□□□ -0.09
SS18-222ENST00000582792 EIF2DP41214 584 aaKnown RBP14.48□□□□□ -0.09
SS18-222ENST00000582792 P2RY2P41231 377 aa14.48□□□□□ -0.09
SS18-222ENST00000582792 SLC7A9P82251 487 aa14.48□□□□□ -0.09
SS18-222ENST00000582792 RRAGBQ5VZM2 374 aa14.48□□□□□ -0.09
SS18-222ENST00000582792 LMBRD2Q68DH5 695 aaPredicted RBP14.48□□□□□ -0.09
SS18-222ENST00000582792 ADGRG2Q8IZP9 1017 aa14.48□□□□□ -0.09
SS18-222ENST00000582792 GPD1LQ8N335 351 aa14.48□□□□□ -0.09
SS18-222ENST00000582792 IL17RCQ8NAC3 791 aa14.48□□□□□ -0.09
SS18-222ENST00000582792 OR5B17Q8NGF7 314 aa14.48□□□□□ -0.09
SS18-222ENST00000582792 NOC3LQ8WTT2 800 aaKnown RBP14.48□□□□□ -0.09
SS18-222ENST00000582792 PIGKQ92643 395 aa14.48□□□□□ -0.09
SS18-222ENST00000582792 HPDLQ96IR7 371 aa14.48□□□□□ -0.09
SS18-222ENST00000582792 FGFBP2Q9BYJ0 223 aa14.48□□□□□ -0.09
SS18-222ENST00000582792 RNF38Q9H0F5 515 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms