RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 ELF2Q15723 593 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PLK5Q496M5 336 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 XKR4Q5GH76 650 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TCERG1LQ5VWI1 586 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PDZD4Q76G19 769 aaPredicted RBP9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ENOSF1Q7L5Y1 443 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 RALGPS2Q86X27 583 aaPredicted RBP9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 RNF214Q8ND24 703 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 HASPINQ8TF76 798 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 RABGGTAQ92696 567 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 E2F7Q96AV8 911 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 DDX27Q96GQ7 796 aaKnown RBP9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CPB2Q96IY4 423 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 MED15Q96RN5 788 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CGRRF1Q99675 332 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PAAF1Q9BRP4 392 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 EDEM3Q9BZQ6 932 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TRIM5Q9C035 493 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 NUCKS1Q9H1E3 243 aaKnown RBP9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 NDST4Q9H3R1 872 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 NXF3Q9H4D5 531 aaKnown RBP9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PCIF1Q9H4Z3 704 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TRPV4Q9HBA0 871 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TMEM9BQ9NQ34 198 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 C2orf42Q9NWW7 574 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CNTN3Q9P232 1028 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ITGA11Q9UKX5 1188 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 UBQLN1Q9UMX0 589 aaKnown RBP9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CDY1Q9Y6F8 540 aa9.35□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ITIH6Q6UXX5 1313 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 MYBPHLA2RUH7 354 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 EIF4E1BA6NMX2 242 aaKnown RBP9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 SLC38A8A6NNN8 435 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 SPECC1L-ADORA2AF8WAN1 911 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CHADO15335 359 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 HYAL3O43820 417 aaPredicted RBP9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 RHOBTB1O94844 696 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 STAU1O95793 577 aaKnown RBP9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 FAM163BP0C2L3 166 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TMEM191BP0C7N4 346 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CCDC172P0C7W6 258 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 FGFR3P22607 806 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CDC25BP30305 580 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ATICP31939 592 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CTHP32929 405 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 RPL9P32969 192 aaKnown RBP9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ACOT2P49753 483 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 MXI1P50539 228 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 COPB1P53618 953 aaKnown RBP9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 FANCCQ00597 558 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 KCNH2Q12809 1159 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 TMEM132DQ14C87 1099 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 KRT31Q15323 416 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 DCAF17Q5H9S7 520 aaPredicted RBP9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 FIGNQ5HY92 759 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 WDR44Q5JSH3 913 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 KIAA1211LQ6NV74 962 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CRELD2Q6UXH1 353 aaPredicted RBP9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ALKAL1Q6UXT8 129 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 GBP6Q6ZN66 633 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 GAS2L3Q86XJ1 694 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 IRF2BP1Q8IU81 584 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CBWD2Q8IUF1 395 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CREBRFQ8IUR6 639 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 YAF2Q8IY57 180 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 BEST2Q8NFU1 509 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 SLC35C1Q96A29 364 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 SAAL1Q96ER3 474 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 ERGIC2Q96RQ1 377 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 CORO1BQ9BR76 489 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 HSD3B7Q9H2F3 369 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 RTN4Q9NQC3 1192 aaKnown RBP9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 IMPACTQ9P2X3 320 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 FBXL5Q9UKA1 691 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 USP20Q9Y2K6 914 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 COQ4Q9Y3A0 265 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 BACE2Q9Y5Z0 518 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 PI4KAP42356 2102 aa9.34□□□□□ -0.91
PDLIM1P3-201ENST00000582370 NCANO14594 1321 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 ACACAQ13085 2346 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 BCLAF3A2AJT9 711 aaKnown RBP9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 FAM221BA6H8Z2 402 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CASTOR2A6NHX0 329 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 HEPACAM2A8MVW5 462 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 H0Y626 953 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TMEM189-UBE2V1I3L0A0 370 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 PES1O00541 588 aaKnown RBP9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 NRG2O14511 850 aaPredicted RBP9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 NRDCO43847 1150 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 TRIM16O95361 564 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 THP07101 528 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 AKAP5P24588 427 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 VIPR2P41587 438 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 SOX9P48436 509 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 FMO5P49326 533 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CASP4P49662 377 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 CREB5Q02930 508 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 UBXN1Q04323 297 aa9.33□□□□□ -0.92
PDLIM1P3-201ENST00000582370 FCHO2Q0JRZ9 810 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms