RNA–Protein interactions for RNA: ENST00000580879.5

NUP85-215, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-215ENST00000580879 TTLL2Q9BWV7 592 aa14.07□□□□□ -0.16
NUP85-215ENST00000580879 BRD9Q9H8M2 597 aa14.07□□□□□ -0.16
NUP85-215ENST00000580879 ARHGEF3Q9NR81 526 aa14.07□□□□□ -0.16
NUP85-215ENST00000580879 DACH1Q9UI36 760 aa14.07□□□□□ -0.16
NUP85-215ENST00000580879 CCL26Q9Y258 94 aa14.07□□□□□ -0.16
NUP85-215ENST00000580879 COL4A3Q01955 1670 aa14.07□□□□□ -0.16
NUP85-215ENST00000580879 C2orf78A6NCI8 922 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 STK25O00506 426 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 PMM2O15305 246 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 MBD3O95983 291 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 ABL1P00519 1130 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 FAM200BP0CF97 657 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 TRIM21P19474 475 aaKnown RBP14.06□□□□□ -0.16
NUP85-215ENST00000580879 RFX1P22670 979 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 AVPR1AP37288 418 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 MTIF2P46199 727 aaKnown RBP14.06□□□□□ -0.16
NUP85-215ENST00000580879 SLC5A3P53794 718 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 CETN1Q12798 172 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 TAF10Q12962 218 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 PPP1R26Q5T8A7 1209 aaPredicted RBP14.06□□□□□ -0.16
NUP85-215ENST00000580879 CWF19L1Q69YN2 538 aaKnown RBP14.06□□□□□ -0.16
NUP85-215ENST00000580879 RBM43Q6ZSC3 357 aaKnown RBP14.06□□□□□ -0.16
NUP85-215ENST00000580879 RRAGAQ7L523 313 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 MON1AQ86VX9 555 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 ARHGEF19Q8IW93 802 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 MFSD6LQ8IWD5 586 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 YAF2Q8IY57 180 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 NUP93Q8N1F7 819 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 PPM1KQ8N3J5 372 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 SCAMP5Q8TAC9 235 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 LMO3Q8TAP4 145 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 DEPDC1BQ8WUY9 529 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 USP13Q92995 863 aaPredicted RBP14.06□□□□□ -0.16
NUP85-215ENST00000580879 TMEM176AQ96HP8 235 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 FAXDC2Q96IV6 333 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 ZFYVE19Q96K21 471 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 CEP295NLQ96MC4 621 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 NT5C1BQ96P26 610 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 HNRNPABQ99729 332 aaKnown RBP14.06□□□□□ -0.16
NUP85-215ENST00000580879 CRACR2AQ9BSW2 395 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 INTS2Q9H0H0 1204 aaKnown RBP14.06□□□□□ -0.16
NUP85-215ENST00000580879 TBC1D17Q9HA65 648 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 TRPM5Q9NZQ8 1165 aa14.06□□□□□ -0.16
NUP85-215ENST00000580879 TNFRSF10BO14763 440 aa14.05□□□□□ -0.16
NUP85-215ENST00000580879 ZNF263O14978 683 aa14.05□□□□□ -0.16
NUP85-215ENST00000580879 P4HA2O15460 535 aa14.05□□□□□ -0.16
NUP85-215ENST00000580879 DDX6P26196 483 aaKnown RBP eCLIP14.05□□□□□ -0.16
NUP85-215ENST00000580879 YWHAQP27348 245 aa14.05□□□□□ -0.16
NUP85-215ENST00000580879 ERCC5P28715 1186 aaPredicted RBP14.05□□□□□ -0.16
NUP85-215ENST00000580879 MLF2Q15773 248 aaPredicted RBP14.05□□□□□ -0.16
NUP85-215ENST00000580879 SLC44A4Q53GD3 710 aa14.05□□□□□ -0.16
NUP85-215ENST00000580879 CLEC20AQ6ZU45 233 aa14.05□□□□□ -0.16
NUP85-215ENST00000580879 GPRIN1Q7Z2K8 1008 aa14.05□□□□□ -0.16
NUP85-215ENST00000580879 UBR7Q8N806 425 aa14.05□□□□□ -0.16
NUP85-215ENST00000580879 ARL14EPQ8N8R7 260 aaPredicted RBP14.05□□□□□ -0.16
NUP85-215ENST00000580879 TMEM105Q8N8V8 129 aa14.05□□□□□ -0.16
NUP85-215ENST00000580879 EHBP1Q8NDI1 1231 aa14.05□□□□□ -0.16
NUP85-215ENST00000580879 RIN3Q8TB24 985 aa14.05□□□□□ -0.16
NUP85-215ENST00000580879 FBXO32Q969P5 355 aa14.05□□□□□ -0.16
NUP85-215ENST00000580879 HEBP1Q9NRV9 189 aa14.05□□□□□ -0.16
NUP85-215ENST00000580879 GCNT4Q9P109 453 aa14.05□□□□□ -0.16
NUP85-215ENST00000580879 ZNF318Q5VUA4 2279 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 TRAV19A0A0A6YYK7 116 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 ZNF840PA6NDX5 716 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 PI15O43692 258 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 RTN3O95197 1032 aaPredicted RBP14.04□□□□□ -0.16
NUP85-215ENST00000580879 CALCAP01258 141 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 CKMP06732 381 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 CD19P15391 556 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 CD72P21854 359 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 TBXAS1P24557 533 aaPredicted RBP14.04□□□□□ -0.16
NUP85-215ENST00000580879 AVPR2P30518 371 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 PFKPQ01813 784 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 APBA1Q02410 837 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 CCDC183Q5T5S1 534 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 ASTLQ6HA08 431 aaPredicted RBP14.04□□□□□ -0.16
NUP85-215ENST00000580879 TMEM270Q6UE05 265 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 SASS6Q6UVJ0 657 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 TPRG1Q6ZUI0 275 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 C11orf57Q6ZUT1 292 aaPredicted RBP14.04□□□□□ -0.16
NUP85-215ENST00000580879 TTC39CQ8N584 583 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 CELF5Q8N6W0 485 aaKnown RBP14.04□□□□□ -0.16
NUP85-215ENST00000580879 TTC8Q8TAM2 541 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 BPIFB1Q8TDL5 484 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 IRF7Q92985 503 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 E2F7Q96AV8 911 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 SLITRK1Q96PX8 696 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 FOXQ1Q9C009 403 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 DNAI2Q9GZS0 605 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 THAP9Q9H5L6 903 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 CSNK1G1Q9HCP0 422 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 SAMSN1Q9NSI8 373 aaKnown RBP14.04□□□□□ -0.16
NUP85-215ENST00000580879 TDP1Q9NUW8 608 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 EHD2Q9NZN4 543 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 GMIPQ9P107 970 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 TMEM63CQ9P1W3 806 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 CHORDC1Q9UHD1 332 aaPredicted RBP14.04□□□□□ -0.16
NUP85-215ENST00000580879 HCN4Q9Y3Q4 1203 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 PCDHB4Q9Y5E5 795 aa14.04□□□□□ -0.16
NUP85-215ENST00000580879 MUC6Q6W4X9 2439 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms