RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 TRIML1Q8N9V2 468 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 B3GALNT2Q8NCR0 500 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 ELMO3Q96BJ8 720 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 CEP295NLQ96MC4 621 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 FAM126AQ9BYI3 521 aaPredicted RBP26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 CHRDQ9H2X0 955 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 DPEP3Q9H4B8 488 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 IL21Q9HBE4 155 aa26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 ARMCX3Q9UH62 379 aaPredicted RBP26.46■■□□□ 1.83
CDC42EP4-205ENST00000580315 HMGA1P17096 107 aaKnown RBP26.45■■□□□ 1.82
CDC42EP4-205ENST00000580315 GDI1P31150 447 aa26.45■■□□□ 1.82
CDC42EP4-205ENST00000580315 GRIK1P39086 918 aa26.45■■□□□ 1.82
CDC42EP4-205ENST00000580315 VIPR2P41587 438 aa26.45■■□□□ 1.82
CDC42EP4-205ENST00000580315 DCAF17Q5H9S7 520 aaPredicted RBP26.45■■□□□ 1.82
CDC42EP4-205ENST00000580315 SPOPLQ6IQ16 392 aa26.45■■□□□ 1.82
CDC42EP4-205ENST00000580315 MAMSTRQ6ZN01 415 aa26.45■■□□□ 1.82
CDC42EP4-205ENST00000580315 NELFBQ8WX92 580 aa26.45■■□□□ 1.82
CDC42EP4-205ENST00000580315 SECISBP2LQ93073 1101 aaKnown RBP26.45■■□□□ 1.82
CDC42EP4-205ENST00000580315 CEP63Q96MT8 703 aa26.45■■□□□ 1.82
CDC42EP4-205ENST00000580315 ELOVL4Q9GZR5 314 aa26.45■■□□□ 1.82
CDC42EP4-205ENST00000580315 METTL14Q9HCE5 456 aaKnown RBP26.45■■□□□ 1.82
CDC42EP4-205ENST00000580315 KIAA1468Q9P260 1216 aa26.45■■□□□ 1.82
CDC42EP4-205ENST00000580315 NME7Q9Y5B8 376 aa26.45■■□□□ 1.82
CDC42EP4-205ENST00000580315 ATP8B3O60423 1300 aa26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 SLC38A8A6NNN8 435 aa26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 PPP1R3GB7ZBB8 358 aa26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 TRIM66O15016 1216 aa26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 NOL4O94818 638 aa26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 BMP6P22004 513 aa26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 NOP14P78316 857 aaKnown RBP26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 FOXR2Q6PJQ5 311 aa26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 CLEC17AQ6ZS10 378 aa26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 FBXL13Q8NEE6 735 aa26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 DEPDC1BQ8WUY9 529 aa26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 FAM3CQ92520 227 aa26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 TRMT2BQ96GJ1 504 aaKnown RBP26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 SPATA17Q96L03 361 aa26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 SDCBP2Q9H190 292 aa26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 TASP1Q9H6P5 420 aa26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 PIAS3Q9Y6X2 628 aa26.44■■□□□ 1.82
CDC42EP4-205ENST00000580315 TDGF1P13385 188 aa26.43■■□□□ 1.82
CDC42EP4-205ENST00000580315 DDX6P26196 483 aaKnown RBP eCLIP26.43■■□□□ 1.82
CDC42EP4-205ENST00000580315 ASPAP45381 313 aa26.43■■□□□ 1.82
CDC42EP4-205ENST00000580315 NLRP12P59046 1061 aa26.43■■□□□ 1.82
CDC42EP4-205ENST00000580315 CYP4F8P98187 520 aa26.43■■□□□ 1.82
CDC42EP4-205ENST00000580315 STXBP5Q5T5C0 1151 aa26.43■■□□□ 1.82
CDC42EP4-205ENST00000580315 FILIP1Q7Z7B0 1213 aa26.43■■□□□ 1.82
CDC42EP4-205ENST00000580315 UNC93AQ86WB7 457 aa26.43■■□□□ 1.82
CDC42EP4-205ENST00000580315 MRPS31Q92665 395 aaKnown RBP26.43■■□□□ 1.82
CDC42EP4-205ENST00000580315 MYRFLQ96LU7 910 aa26.43■■□□□ 1.82
CDC42EP4-205ENST00000580315 DNAI2Q9GZS0 605 aa26.43■■□□□ 1.82
CDC42EP4-205ENST00000580315 NIF3L1Q9GZT8 377 aa26.43■■□□□ 1.82
CDC42EP4-205ENST00000580315 CYP3A43Q9HB55 503 aa26.43■■□□□ 1.82
CDC42EP4-205ENST00000580315 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.43■■□□□ 1.822e-6■■■■■ 149.1
CDC42EP4-205ENST00000580315 EHD2Q9NZN4 543 aa26.43■■□□□ 1.82
CDC42EP4-205ENST00000580315 CTNND2Q9UQB3 1225 aa26.43■■□□□ 1.82
CDC42EP4-205ENST00000580315 DPYSL4O14531 572 aa26.42■■□□□ 1.82
CDC42EP4-205ENST00000580315 F11P03951 625 aa26.42■■□□□ 1.82
CDC42EP4-205ENST00000580315 PAK1Q13153 545 aa26.42■■□□□ 1.82
CDC42EP4-205ENST00000580315 CCDC40Q4G0X9 1142 aa26.42■■□□□ 1.82
CDC42EP4-205ENST00000580315 ARID3BQ8IVW6 561 aaPredicted RBP26.42■■□□□ 1.82
CDC42EP4-205ENST00000580315 MFSD6LQ8IWD5 586 aa26.42■■□□□ 1.82
CDC42EP4-205ENST00000580315 STKLD1Q8NE28 680 aa26.42■■□□□ 1.82
CDC42EP4-205ENST00000580315 C8orf48Q96LL4 319 aa26.42■■□□□ 1.82
CDC42EP4-205ENST00000580315 IER2Q9BTL4 223 aa26.42■■□□□ 1.82
CDC42EP4-205ENST00000580315 LMAN1LQ9HAT1 526 aa26.42■■□□□ 1.82
CDC42EP4-205ENST00000580315 RAB20Q9NX57 234 aa26.42■■□□□ 1.82
CDC42EP4-205ENST00000580315 NCANO14594 1321 aa26.41■■□□□ 1.82
CDC42EP4-205ENST00000580315 SOBPA7XYQ1 873 aa26.41■■□□□ 1.82
CDC42EP4-205ENST00000580315 ZNF263O14978 683 aa26.41■■□□□ 1.82
CDC42EP4-205ENST00000580315 WEE1P30291 646 aa26.41■■□□□ 1.82
CDC42EP4-205ENST00000580315 NDST1P52848 882 aa26.41■■□□□ 1.82
CDC42EP4-205ENST00000580315 WDR44Q5JSH3 913 aa26.41■■□□□ 1.82
CDC42EP4-205ENST00000580315 TTI2Q6NXR4 508 aa26.41■■□□□ 1.82
CDC42EP4-205ENST00000580315 YAF2Q8IY57 180 aa26.41■■□□□ 1.82
CDC42EP4-205ENST00000580315 FAXDC2Q96IV6 333 aa26.41■■□□□ 1.82
CDC42EP4-205ENST00000580315 GBP4Q96PP9 640 aa26.41■■□□□ 1.82
CDC42EP4-205ENST00000580315 MED10Q9BTT4 135 aa26.41■■□□□ 1.82
CDC42EP4-205ENST00000580315 B3GNT5Q9BYG0 378 aa26.41■■□□□ 1.82
CDC42EP4-205ENST00000580315 APOBEC3GQ9HC16 384 aaKnown RBP26.41■■□□□ 1.82
CDC42EP4-205ENST00000580315 HEPACAM2A8MVW5 462 aa26.4■■□□□ 1.82
CDC42EP4-205ENST00000580315 ARNTLO00327 626 aa26.4■■□□□ 1.82
CDC42EP4-205ENST00000580315 SDHBP21912 280 aa26.4■■□□□ 1.82
CDC42EP4-205ENST00000580315 TGM1P22735 817 aa26.4■■□□□ 1.82
CDC42EP4-205ENST00000580315 NRLP54845 237 aa26.4■■□□□ 1.82
CDC42EP4-205ENST00000580315 DENND5BQ6ZUT9 1274 aa26.4■■□□□ 1.82
CDC42EP4-205ENST00000580315 ACOT1Q86TX2 421 aa26.4■■□□□ 1.82
CDC42EP4-205ENST00000580315 IPO9Q96P70 1041 aaKnown RBP26.4■■□□□ 1.82
CDC42EP4-205ENST00000580315 DUSP9Q99956 384 aaKnown RBP26.4■■□□□ 1.82
CDC42EP4-205ENST00000580315 ZNF518BQ9C0D4 1074 aa26.4■■□□□ 1.82
CDC42EP4-205ENST00000580315 CLSTN2Q9H4D0 955 aa26.4■■□□□ 1.82
CDC42EP4-205ENST00000580315 COL4A2P08572 1712 aa26.39■■□□□ 1.82
CDC42EP4-205ENST00000580315 F8VP50 259 aa26.39■■□□□ 1.82
CDC42EP4-205ENST00000580315 CHRNB1P11230 501 aa26.39■■□□□ 1.82
CDC42EP4-205ENST00000580315 AVPR1AP37288 418 aa26.39■■□□□ 1.82
CDC42EP4-205ENST00000580315 LMNB2Q03252 620 aa26.39■■□□□ 1.82
CDC42EP4-205ENST00000580315 PPP2R5DQ14738 602 aa26.39■■□□□ 1.82
CDC42EP4-205ENST00000580315 TMEM150AQ86TG1 271 aa26.39■■□□□ 1.82
CDC42EP4-205ENST00000580315 CRYBG2Q8N1P7 616 aa26.39■■□□□ 1.82
CDC42EP4-205ENST00000580315 TTC39CQ8N584 583 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms