RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 ARMCX6Q7L4S7 300 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 MDGA1Q8NFP4 955 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 USP33Q8TEY7 942 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 CD101Q93033 1021 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 GCNAQ96QF7 691 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 FNBP1Q96RU3 617 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 ZCWPW1Q9H0M4 648 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 WNT6Q9Y6F9 365 aa20.78■□□□□ 0.92
LIMD2-209ENST00000580222 RHOBTB3O94955 611 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 CYP3A5P20815 502 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 SCP2P22307 547 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 TUFMP49411 452 aaKnown RBP20.77■□□□□ 0.92
LIMD2-209ENST00000580222 GPR15P49685 360 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 MCL1Q07820 350 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 EHHADHQ08426 723 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 ALCAMQ13740 583 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 VEPH1Q14D04 833 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 PDGFRLQ15198 375 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 COL28A1Q2UY09 1125 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 ZNF720Q7Z2F6 126 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 CCDC33Q8N5R6 958 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 OLIG1Q8TAK6 271 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 ACDQ96AP0 544 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 GSDMAQ96QA5 445 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 SLC22A12Q96S37 553 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 FGFBP2Q9BYJ0 223 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 SLC32A1Q9H598 525 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 PLEKHA5Q9HAU0 1116 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 SLC39A2Q9NP94 309 aa20.77■□□□□ 0.92
LIMD2-209ENST00000580222 UBQLN1Q9UMX0 589 aaKnown RBP20.77■□□□□ 0.92
LIMD2-209ENST00000580222 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 K7EQS6 105 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 HAPLN1P10915 354 aaPredicted RBP20.76■□□□□ 0.91
LIMD2-209ENST00000580222 SEC13P55735 322 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 AMPD2Q01433 879 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 KLHL40Q2TBA0 621 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 ZC2HC1CQ53FD0 456 aaPredicted RBP20.76■□□□□ 0.91
LIMD2-209ENST00000580222 C2orf27AQ580R0 203 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 CCDC183Q5T5S1 534 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 SDHAF4Q5VUM1 108 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 CC2D1AQ6P1N0 951 aaPredicted RBP20.76■□□□□ 0.91
LIMD2-209ENST00000580222 TMEM92Q6UXU6 159 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 MON1AQ86VX9 555 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 SFTPA1Q8IWL2 248 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 TMEFF1Q8IYR6 380 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 SYAP1Q96A49 352 aaPredicted RBP20.76■□□□□ 0.91
LIMD2-209ENST00000580222 HVCN1Q96D96 273 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 CNOT6LQ96LI5 555 aaKnown RBP20.76■□□□□ 0.91
LIMD2-209ENST00000580222 CYP2S1Q96SQ9 504 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 LINC00597Q9H2U6 94 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 ST6GALNAC4Q9H4F1 302 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 PCDHB13Q9Y5F0 798 aa20.76■□□□□ 0.91
LIMD2-209ENST00000580222 TADA3O75528 432 aa20.75■□□□□ 0.91
LIMD2-209ENST00000580222 CLTAP09496 248 aa20.75■□□□□ 0.91
LIMD2-209ENST00000580222 CASP5P51878 434 aa20.75■□□□□ 0.91
LIMD2-209ENST00000580222 GTF2BQ00403 316 aa20.75■□□□□ 0.91
LIMD2-209ENST00000580222 SCAPQ12770 1279 aa20.75■□□□□ 0.91
LIMD2-209ENST00000580222 MTF1Q14872 753 aa20.75■□□□□ 0.91
LIMD2-209ENST00000580222 ENOX2Q16206 610 aaKnown RBP20.75■□□□□ 0.91
LIMD2-209ENST00000580222 CAVIN1Q6NZI2 390 aaKnown RBP20.75■□□□□ 0.91
LIMD2-209ENST00000580222 CPA6Q8N4T0 437 aa20.75■□□□□ 0.91
LIMD2-209ENST00000580222 TTC16Q8NEE8 873 aa20.75■□□□□ 0.91
LIMD2-209ENST00000580222 SPATA20Q8TB22 786 aa20.75■□□□□ 0.91
LIMD2-209ENST00000580222 BICD1Q96G01 975 aa20.75■□□□□ 0.91
LIMD2-209ENST00000580222 TMLHEQ9NVH6 421 aa20.75■□□□□ 0.91
LIMD2-209ENST00000580222 DUS2Q9NX74 493 aaKnown RBP20.75■□□□□ 0.91
LIMD2-209ENST00000580222 KIAA1468Q9P260 1216 aa20.75■□□□□ 0.91
LIMD2-209ENST00000580222 MAN1B1Q9UKM7 699 aa20.75■□□□□ 0.91
LIMD2-209ENST00000580222 PCNX2A6NKB5 2137 aa20.75■□□□□ 0.91
LIMD2-209ENST00000580222 UBE4BO95155 1302 aa20.75■□□□□ 0.91
LIMD2-209ENST00000580222 ATXN2Q99700 1313 aaKnown RBP20.75■□□□□ 0.91
LIMD2-209ENST00000580222 EIF3DO15371 548 aaKnown RBP eCLIP20.74■□□□□ 0.91
LIMD2-209ENST00000580222 CLDN3O15551 220 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 FAM189A1O60320 539 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 PPP1R37O75864 691 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 CYP11A1P05108 521 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 CHRM1P11229 460 aaPredicted RBP20.74■□□□□ 0.91
LIMD2-209ENST00000580222 ODC1P11926 461 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 MESP2Q0VG99 397 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 LMAN2Q12907 356 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 TAF12Q16514 161 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 SKOR2Q2VWA4 1001 aaPredicted RBP20.74■□□□□ 0.91
LIMD2-209ENST00000580222 GAB4Q2WGN9 574 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 EML3Q32P44 896 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 L1TD1Q5T7N2 865 aaKnown RBP20.74■□□□□ 0.91
LIMD2-209ENST00000580222 RAB44Q7Z6P3 723 aaPredicted RBP20.74■□□□□ 0.91
LIMD2-209ENST00000580222 C11orf74Q86VG3 221 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 TTC30AQ86WT1 665 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 KIAA0895Q8NCT3 520 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 GLIS3Q8NEA6 775 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 OR2I1PQ8NGU4 316 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 OSCP1Q8WVF1 389 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 NUP205Q92621 2012 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 KCNN1Q92952 543 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 KIF9Q9HAQ2 790 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 ADAMTS20P59510 1910 aa20.74■□□□□ 0.91
LIMD2-209ENST00000580222 UPK3BL1B0FP48 263 aa20.73■□□□□ 0.91
LIMD2-209ENST00000580222 UPK3BL2E5RIL1 263 aa20.73■□□□□ 0.91
LIMD2-209ENST00000580222 BIN1O00499 593 aa20.73■□□□□ 0.91
LIMD2-209ENST00000580222 TNFRSF10BO14763 440 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms