RNA–Protein interactions for RNA: ENST00000579880.5

NDEL1-206, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-206ENST00000579880 NOP14P78316 857 aaKnown RBP18.4■□□□□ 0.54
NDEL1-206ENST00000579880 USP4Q13107 963 aa18.4■□□□□ 0.54
NDEL1-206ENST00000579880 ZNF77Q15935 545 aa18.4■□□□□ 0.54
NDEL1-206ENST00000579880 ZACNQ401N2 412 aa18.4■□□□□ 0.54
NDEL1-206ENST00000579880 SCARA5Q6ZMJ2 495 aa18.4■□□□□ 0.54
NDEL1-206ENST00000579880 TTC16Q8NEE8 873 aa18.4■□□□□ 0.54
NDEL1-206ENST00000579880 TTLL2Q9BWV7 592 aa18.4■□□□□ 0.54
NDEL1-206ENST00000579880 B3GNT5Q9BYG0 378 aa18.4■□□□□ 0.54
NDEL1-206ENST00000579880 TRPM5Q9NZQ8 1165 aa18.4■□□□□ 0.54
NDEL1-206ENST00000579880 DENND4CQ5VZ89 1909 aa18.4■□□□□ 0.54
NDEL1-206ENST00000579880 OTOL1A6NHN0 477 aaPredicted RBP18.39■□□□□ 0.53
NDEL1-206ENST00000579880 CLDN5O00501 218 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 P4HA1P13674 534 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 PFKLP17858 780 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 HDCP19113 662 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 RAP1GAPP47736 663 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 IFNAR2P48551 515 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 CACNA2D1P54289 1103 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 AMPD2Q01433 879 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 CCINQ13939 588 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 BECN1Q14457 450 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 SYNPOQ8N3V7 929 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 ELMO3Q96BJ8 720 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 CCDC34Q96HJ3 373 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 TNIP3Q96KP6 325 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 SDCBP2Q9H190 292 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 EPC1Q9H2F5 836 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 DUS2Q9NX74 493 aaKnown RBP18.39■□□□□ 0.53
NDEL1-206ENST00000579880 ARHGAP26Q9UNA1 814 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 MAPK8IP1Q9UQF2 711 aa18.39■□□□□ 0.53
NDEL1-206ENST00000579880 IKBKBO14920 756 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 MAPK13O15264 365 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 NR2F2P24468 414 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 PPP3CCP48454 512 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 VAMP7P51809 220 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 GRSF1Q12849 480 aaKnown RBP eCLIP18.38■□□□□ 0.53
NDEL1-206ENST00000579880 NFIL3Q16649 462 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 SGSM1Q2NKQ1 1148 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 TMEM196Q5HYL7 178 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 SV2AQ7L0J3 742 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 GUF1Q8N442 669 aaKnown RBP18.38■□□□□ 0.53
NDEL1-206ENST00000579880 CPA6Q8N4T0 437 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 SH3RF2Q8TEC5 729 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 OSCP1Q8WVF1 389 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 TAF4BQ92750 862 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 TMEM30AQ9NV96 361 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 NCDNQ9UBB6 729 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 SMG5Q9UPR3 1016 aaKnown RBP18.38■□□□□ 0.53
NDEL1-206ENST00000579880 WNT6Q9Y6F9 365 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 ATP8B3O60423 1300 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 F5P12259 2224 aa18.38■□□□□ 0.53
NDEL1-206ENST00000579880 VPS13AQ96RL7 3174 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 ZNF840PA6NDX5 716 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 PAPSS2O95340 614 aaPredicted RBP18.37■□□□□ 0.53
NDEL1-206ENST00000579880 TCF3P15923 654 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 PIK3CAP42336 1068 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 IFRD2Q12894 506 aaPredicted RBP18.37■□□□□ 0.53
NDEL1-206ENST00000579880 C1orf220Q5T0J3 134 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 FSTL4Q6MZW2 842 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 FAM35AQ86V20 835 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 KIAA2013Q8IYS2 634 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 NUP93Q8N1F7 819 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 DCLK2Q8N568 766 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 ATP2A3Q93084 1043 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 CHFRQ96EP1 664 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 SLITRK1Q96PX8 696 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 MED10Q9BTT4 135 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 ECT2Q9H8V3 914 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 PTPRDP23468 1912 aa18.37■□□□□ 0.53
NDEL1-206ENST00000579880 TRDMT1O14717 391 aaKnown RBP18.36■□□□□ 0.53
NDEL1-206ENST00000579880 AKAP3O75969 853 aa18.36■□□□□ 0.53
NDEL1-206ENST00000579880 ABL1P00519 1130 aa18.36■□□□□ 0.53
NDEL1-206ENST00000579880 ASS1P00966 412 aaKnown RBP18.36■□□□□ 0.53
NDEL1-206ENST00000579880 HLA-DRAP01903 254 aa18.36■□□□□ 0.53
NDEL1-206ENST00000579880 KRT13P13646 458 aa18.36■□□□□ 0.53
NDEL1-206ENST00000579880 RPL13P26373 211 aaKnown RBP18.36■□□□□ 0.53
NDEL1-206ENST00000579880 TAF10Q12962 218 aa18.36■□□□□ 0.53
NDEL1-206ENST00000579880 INTS8Q75QN2 995 aaKnown RBP18.36■□□□□ 0.53
NDEL1-206ENST00000579880 ACOT1Q86TX2 421 aa18.36■□□□□ 0.53
NDEL1-206ENST00000579880 FAM186BQ8IYM0 893 aa18.36■□□□□ 0.53
NDEL1-206ENST00000579880 SECISBP2LQ93073 1101 aaKnown RBP18.36■□□□□ 0.53
NDEL1-206ENST00000579880 EXOC4Q96A65 974 aa18.36■□□□□ 0.53
NDEL1-206ENST00000579880 ZNF638Q14966 1978 aaKnown RBP18.35■□□□□ 0.53
NDEL1-206ENST00000579880 GREB1Q4ZG55 1949 aa18.35■□□□□ 0.53
NDEL1-206ENST00000579880 CHURC1-FNTBB4DL54 471 aa18.35■□□□□ 0.53
NDEL1-206ENST00000579880 K7ESF4 209 aa18.35■□□□□ 0.53
NDEL1-206ENST00000579880 RTN3O95197 1032 aaPredicted RBP18.35■□□□□ 0.53
NDEL1-206ENST00000579880 TRIM49P0CI25 452 aa18.35■□□□□ 0.53
NDEL1-206ENST00000579880 TRIM49CP0CI26 452 aa18.35■□□□□ 0.53
NDEL1-206ENST00000579880 YWHAQP27348 245 aa18.35■□□□□ 0.53
NDEL1-206ENST00000579880 GJA4P35212 333 aa18.35■□□□□ 0.53
NDEL1-206ENST00000579880 PSMC2P35998 433 aaKnown RBP18.35■□□□□ 0.53
NDEL1-206ENST00000579880 FNTBP49356 437 aa18.35■□□□□ 0.53
NDEL1-206ENST00000579880 NDST1P52848 882 aa18.35■□□□□ 0.53
NDEL1-206ENST00000579880 SLC7A9P82251 487 aa18.35■□□□□ 0.53
NDEL1-206ENST00000579880 EML3Q32P44 896 aa18.35■□□□□ 0.53
NDEL1-206ENST00000579880 SPOPLQ6IQ16 392 aa18.35■□□□□ 0.53
NDEL1-206ENST00000579880 PAQR9Q6ZVX9 377 aa18.35■□□□□ 0.53
NDEL1-206ENST00000579880 SMARCD1Q96GM5 515 aa18.35■□□□□ 0.53
NDEL1-206ENST00000579880 P2RY13Q9BPV8 354 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms