RNA–Protein interactions for RNA: ENST00000578340.4

AC116003.1-201, humanhuman

TSL 3 BASIC

Gene AC116003.1, Length 536 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116003.1-201ENST00000578340 TMEM8AQ9HCN3 771 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 TDP1Q9NUW8 608 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 ZMYM5Q9UJ78 669 aa17.11■□□□□ 0.33
AC116003.1-201ENST00000578340 MYO15AQ9UKN7 3530 aa17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 ZFHX2Q9C0A1 2572 aaPredicted RBP17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 CCDC130P13994 396 aa17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 BMP6P22004 513 aa17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 CCNE1P24864 410 aa17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 IFRD2Q12894 506 aaPredicted RBP17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 KRT39Q6A163 491 aa17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 FAM35AQ86V20 835 aa17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 C1orf210Q8IVY1 113 aa17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 ZC3H3Q8IXZ2 948 aaKnown RBP17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 FAM3CQ92520 227 aa17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 TWNKQ96RR1 684 aa17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 KCNK16Q96T55 309 aa17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 NELL2Q99435 816 aa17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 TTLL2Q9BWV7 592 aa17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 IMPG2Q9BZV3 1241 aa17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 CHMP5Q9NZZ3 219 aa17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 MRPS17Q9Y2R5 130 aaKnown RBP17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 USP34Q70CQ2 3546 aa17.1■□□□□ 0.33
AC116003.1-201ENST00000578340 FANCMQ8IYD8 2048 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 TRAV19A0A0A6YYK7 116 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 SOBPA7XYQ1 873 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 BIN1O00499 593 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 MAN2B1O00754 1011 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 GTF2H1P32780 548 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 MXI1P50539 228 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 KPNA1P52294 538 aaPredicted RBP17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 FKBP3Q00688 224 aaKnown RBP17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 TRIM68Q6AZZ1 485 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 FRMD5Q7Z6J6 570 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 FUKQ8N0W3 1084 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 ARL14EPQ8N8R7 260 aaPredicted RBP17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 C12orf29Q8N999 325 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 TTC16Q8NEE8 873 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 CLDN23Q96B33 292 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 CEP295NLQ96MC4 621 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 NIF3L1Q9GZT8 377 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 GKN1Q9NS71 199 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 FAM49BQ9NUQ9 324 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 THG1LQ9NWX6 298 aaKnown RBP17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 GCNT4Q9P109 453 aa17.09■□□□□ 0.33
AC116003.1-201ENST00000578340 ATG2BQ96BY7 2078 aa17.08■□□□□ 0.33
AC116003.1-201ENST00000578340 MYO16Q9Y6X6 1858 aa17.08■□□□□ 0.33
AC116003.1-201ENST00000578340 SLC16A3O15427 465 aaKnown RBP17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 CKMP06732 381 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 USP17L7P0C7H9 530 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 CD58P19256 250 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 NBL1P41271 181 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 PLCB2Q00722 1185 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 LRRC63Q05C16 580 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 INCA1Q0VD86 236 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 TAF10Q12962 218 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 ZNF268Q14587 947 aaPredicted RBP17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 DCAF17Q5H9S7 520 aaPredicted RBP17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 TCERG1LQ5VWI1 586 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 KLHL10Q6JEL2 608 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 TXNDC11Q6PKC3 985 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 UNC93AQ86WB7 457 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 MAML2Q8IZL2 1156 aaPredicted RBP17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 CRYBG2Q8N1P7 616 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 SLC2A14Q8TDB8 520 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 FAM83CQ9BQN1 747 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 GTPBP4Q9BZE4 634 aaKnown RBP17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 KIF9Q9HAQ2 790 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 HPS4Q9NQG7 708 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 KRT82Q9NSB4 513 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 SPATA6Q9NWH7 488 aaPredicted RBP17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 TRPM5Q9NZQ8 1165 aa17.08■□□□□ 0.32
AC116003.1-201ENST00000578340 ATP8B3O60423 1300 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 ZNF840PA6NDX5 716 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 OTOL1A6NHN0 477 aaPredicted RBP17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 PPP1R3GB7ZBB8 358 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 SPECC1L-ADORA2AF8WAN1 911 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 PSMA7O14818 248 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 NCAM2O15394 837 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 AP1G2O75843 785 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 BEST1O76090 585 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 ARSAP15289 507 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 HDCP19113 662 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 CTHP32929 405 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 MLLT6P55198 1093 aaPredicted RBP17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 STIM1Q13586 685 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 MORC3Q14149 939 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 CBWD6Q4V339 395 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 WDR44Q5JSH3 913 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 CBWD3Q5JTY5 395 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 CBWD5Q5RIA9 395 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 NUP93Q8N1F7 819 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 CCDC150Q8NCX0 1101 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 FBXL13Q8NEE6 735 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 ZMIZ2Q8NF64 920 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 SCAMP5Q8TAC9 235 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 WHAMMQ8TF30 809 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 SMARCD1Q96GM5 515 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 DHTKD1Q96HY7 919 aaPredicted RBP17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 SMOQ99835 787 aa17.07■□□□□ 0.32
AC116003.1-201ENST00000578340 DUSP9Q99956 384 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms