RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 STK3Q13188 491 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 TUSC3Q13454 348 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 CAMK2GQ13555 558 aaPredicted RBP4.35□□□□□ -1.71
PTPRM-206ENST00000578093 RAB33AQ14088 237 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 LRP8Q14114 963 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 EPHA7Q15375 998 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 SF3A2Q15428 464 aaKnown RBP4.35□□□□□ -1.71
PTPRM-206ENST00000578093 UVSSAQ2YD98 709 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 BMP2KLQ5H9B9 411 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 FAM78AQ5JUQ0 283 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 ZBTB41Q5SVQ8 909 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 CDCA2Q69YH5 1023 aaPredicted RBP4.35□□□□□ -1.71
PTPRM-206ENST00000578093 LAIR1Q6GTX8 287 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 PKN3Q6P5Z2 889 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 SLC27A1Q6PCB7 646 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 BLOC1S2Q6QNY1 142 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 VITQ6UXI7 678 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 PRR23CQ6ZRP0 262 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 MAEAQ7L5Y9 396 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 NOSTRINQ8IVI9 506 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 TRIM42Q8IWZ5 723 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 GPR65Q8IYL9 337 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 AGGF1Q8N302 714 aaeCLIP4.35□□□□□ -1.71
PTPRM-206ENST00000578093 C12orf50Q8NA57 414 aaPredicted RBP4.35□□□□□ -1.71
PTPRM-206ENST00000578093 NETO1Q8TDF5 533 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 GPBAR1Q8TDU6 330 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 PIGOQ8TEQ8 1089 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 TCP11Q8WWU5 503 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 DNASE1L2Q92874 299 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 ELMO3Q96BJ8 720 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 ZSWIM3Q96MP5 696 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 EIF2AK1Q9BQI3 630 aaKnown RBP4.35□□□□□ -1.71
PTPRM-206ENST00000578093 TTPALQ9BTX7 342 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 KIFC3Q9BVG8 833 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 SLKQ9H2G2 1235 aaPredicted RBP4.35□□□□□ -1.71
PTPRM-206ENST00000578093 SMOC1Q9H4F8 434 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 SH3GLB2Q9NR46 395 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 SEMA4GQ9NTN9 838 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 GMEB2Q9UKD1 530 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 TLR6Q9Y2C9 796 aa4.35□□□□□ -1.71
PTPRM-206ENST00000578093 MRPS23Q9Y3D9 190 aaKnown RBP4.35□□□□□ -1.71
PTPRM-206ENST00000578093 HELZP42694 1942 aaKnown RBP4.34□□□□□ -1.71
PTPRM-206ENST00000578093 TCHHQ07283 1943 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 LRRIQ4A6NIV6 560 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 MEFVO15553 781 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-206ENST00000578093 ASAP2O43150 1006 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 TBC1D4O60343 1298 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 CCNT1O60563 726 aaKnown RBP4.34□□□□□ -1.71
PTPRM-206ENST00000578093 CDC45O75419 566 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 SLITRK3O94933 977 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 DEXIO95424 95 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 VNN2O95498 520 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 BPNT1O95861 308 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 DLGAP3O95886 979 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 RETP07949 1114 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 CHRNB1P11230 501 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 TFE3P19532 575 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-206ENST00000578093 SDHBP21912 280 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 ERCC5P28715 1186 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-206ENST00000578093 GDI1P31150 447 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 HSPA4P34932 840 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 EIF4A3P38919 411 aaKnown RBP4.34□□□□□ -1.71
PTPRM-206ENST00000578093 VIPR2P41587 438 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 CHRNA4P43681 627 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 CLCNKBP51801 687 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 EVCP57679 992 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 ID3Q02535 119 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 COL9A2Q14055 689 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-206ENST00000578093 SEPT6Q14141 434 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 TFDP1Q14186 410 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 KRT32Q14532 448 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 MXD4Q14582 209 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-206ENST00000578093 STXBP5Q5T5C0 1151 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 N4BP2L1Q5TBK1 243 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-206ENST00000578093 HEATR6Q6AI08 1181 aaKnown RBP4.34□□□□□ -1.71
PTPRM-206ENST00000578093 PPP4R3AQ6IN85 833 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-206ENST00000578093 ZNF852Q6ZMS4 543 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 Q6ZS46 218 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 PIK3AP1Q6ZUJ8 805 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 HDXQ7Z353 690 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.34□□□□□ -1.71
PTPRM-206ENST00000578093 NEK8Q86SG6 692 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 NT5DC4Q86YG4 428 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 TPH2Q8IWU9 490 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 FBXL16Q8N461 479 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 GOLM1Q8NBJ4 401 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 SECISBP2LQ93073 1101 aaKnown RBP4.34□□□□□ -1.71
PTPRM-206ENST00000578093 ELSPBP1Q96BH3 223 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 RHOVQ96L33 236 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 FAM20AQ96MK3 541 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 PPP1R10Q96QC0 940 aaKnown RBP4.34□□□□□ -1.71
PTPRM-206ENST00000578093 YIPF2Q9BWQ6 316 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 NFKBIZQ9BYH8 718 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 TGIF2Q9GZN2 237 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 CCDC113Q9H0I3 377 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 ATXN3LQ9H3M9 355 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 ZSWIM4Q9H7M6 989 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 BRD9Q9H8M2 597 aa4.34□□□□□ -1.71
PTPRM-206ENST00000578093 LMAN1LQ9HAT1 526 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms