RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 RPF1Q9H9Y2 349 aaKnown RBP15.19■□□□□ 0.02
PPP4R1-206ENST00000577779 ARHGEF4Q9NR80 690 aa15.19■□□□□ 0.02
PPP4R1-206ENST00000577779 TMLHEQ9NVH6 421 aa15.19■□□□□ 0.02
PPP4R1-206ENST00000577779 GCNT4Q9P109 453 aa15.19■□□□□ 0.02
PPP4R1-206ENST00000577779 CALCOCO1Q9P1Z2 691 aa15.19■□□□□ 0.02
PPP4R1-206ENST00000577779 SUSD2Q9UGT4 822 aa15.19■□□□□ 0.02
PPP4R1-206ENST00000577779 ARHGAP26Q9UNA1 814 aa15.19■□□□□ 0.02
PPP4R1-206ENST00000577779 PTPN13Q12923 2485 aa15.19■□□□□ 0.02
PPP4R1-206ENST00000577779 IGHV1OR15-9A0A0B4J2B8 117 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 J3QKU1 62 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 PIRO00625 290 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 CTDNEP1O95476 244 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 MAPTP10636 758 aaKnown RBP15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 GNSP15586 552 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 GRIA2P42262 883 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 TNFRSF4P43489 277 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 TSPY1Q01534 308 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 KDSRQ06136 332 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 GRIK2Q13002 908 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 RESTQ13127 1097 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 MAPK7Q13164 816 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 SAFBQ15424 915 aaKnown RBP eCLIP15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 NFE2Q16621 373 aaPredicted RBP15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 KYAT1Q16773 422 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 FILIP1Q7Z7B0 1213 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 SKAP1Q86WV1 359 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 GALNT15Q8N3T1 639 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 LSM14AQ8ND56 463 aaKnown RBP15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 TMEM161BQ8NDZ6 487 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 LRRC15Q8TF66 581 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 KIF2CQ99661 725 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 NTPCRQ9BSD7 190 aaKnown RBP15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 RUSC1Q9BVN2 902 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 ZDHHC5Q9C0B5 715 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 PDRG1Q9NUG6 133 aa15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 FARP1Q9Y4F1 1045 aaPredicted RBP15.18■□□□□ 0.02
PPP4R1-206ENST00000577779 MYOFQ9NZM1 2061 aa15.17■□□□□ 0.02
PPP4R1-206ENST00000577779 ANO9A1A5B4 782 aa15.17■□□□□ 0.02
PPP4R1-206ENST00000577779 E9PMD0 336 aa15.17■□□□□ 0.02
PPP4R1-206ENST00000577779 GABRG2P18507 467 aa15.17■□□□□ 0.02
PPP4R1-206ENST00000577779 EIF2DP41214 584 aaKnown RBP15.17■□□□□ 0.02
PPP4R1-206ENST00000577779 PDE6CP51160 858 aa15.17■□□□□ 0.02
PPP4R1-206ENST00000577779 SMTNP53814 917 aa15.17■□□□□ 0.02
PPP4R1-206ENST00000577779 DHCR24Q15392 516 aa15.17■□□□□ 0.02
PPP4R1-206ENST00000577779 SYCP2LQ5T4T6 812 aa15.17■□□□□ 0.02
PPP4R1-206ENST00000577779 PDCD7Q8N8D1 485 aaKnown RBP15.17■□□□□ 0.02
PPP4R1-206ENST00000577779 SPIRE2Q8WWL2 714 aa15.17■□□□□ 0.02
PPP4R1-206ENST00000577779 PRDM16Q9HAZ2 1276 aa15.17■□□□□ 0.02
PPP4R1-206ENST00000577779 CYP8B1Q9UNU6 501 aa15.17■□□□□ 0.02
PPP4R1-206ENST00000577779 DNM3Q9UQ16 869 aa15.17■□□□□ 0.02
PPP4R1-206ENST00000577779 MYH11P35749 1972 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 KNL1Q8NG31 2342 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 KNTC1P50748 2209 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 A0A0A0MRY4 1105 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 GOLGA8CPA6NN73 597 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 LEFTY2O00292 366 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 CAPN9O14815 690 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 ZBTB24O43167 697 aaPredicted RBP15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 PFKFB2O60825 505 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 ZNF217O75362 1048 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 ADRB2P07550 413 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 NFICP08651 508 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 ATXN1LP0C7T5 689 aaKnown RBP15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 FDPSP14324 419 aaKnown RBP15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 CYP2F1P24903 491 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 ITPKBP27987 946 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 TAF6P49848 677 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 FOSBP53539 338 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 ZXDBP98169 803 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 ATP2C1P98194 919 aaPredicted RBP15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 CAMK2BQ13554 666 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 TMEM132DQ14C87 1099 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 RINT1Q6NUQ1 792 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 TRMT11Q7Z4G4 463 aaKnown RBP15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 C12orf40Q86WS4 652 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 ADGRG2Q8IZP9 1017 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 PRORYQ9H606 182 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 TOR4AQ9NXH8 423 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 LRWD1Q9UFC0 647 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 KCNG1Q9UIX4 513 aa15.16■□□□□ 0.02
PPP4R1-206ENST00000577779 TEX15Q9BXT5 2789 aa15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 FAM149AA5PLN7 773 aa15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 SLC9A3R1O14745 358 aaPredicted RBP15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 OGTO15294 1046 aa15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 FAM189A1O60320 539 aa15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 NDUFS2O75306 463 aa15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 ADH1CP00326 375 aa15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 PLS3P13797 630 aa15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 HOXB2P14652 356 aa15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 RAD51AP2Q09MP3 1159 aa15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 TRIM29Q14134 588 aa15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 ZNF174Q15697 407 aa15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 WDR45BQ5MNZ6 344 aa15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 C1orf186Q6ZWK4 172 aa15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 CD302Q8IX05 232 aa15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 ZNF513Q8N8E2 541 aaPredicted RBP15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 SNX29Q8TEQ0 813 aa15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 ZNF419Q96HQ0 510 aaPredicted RBP15.15■□□□□ 0.02
PPP4R1-206ENST00000577779 CDC6Q99741 560 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms